PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g03380.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB01g22740.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB01g71800.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB01g72590.mRNA1 Rosmarinic Acid TAT low borderline TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB02g05420.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g15310.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g15880.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g15940.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g16570.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g16590.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g17750.mRNA1 Rosmarinic Acid TAT low borderline TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB02g21030.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g28010.mRNA1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB02g55120.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB02g57180.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB02g77990.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB02g78910.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g79220.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g87050.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g87060.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB02g90780.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB03g29050.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB03g83000.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB03g90690.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB04g27920.mRNA1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB04g28550.mRNA1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB04g57230.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB05g06930.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB05g27190.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB05g27200.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB05g27700.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB05g27710.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB05g35630.mRNA1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB05g47940.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB05g50230.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB06g08550.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB06g18070.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB06g65400.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB06g74020.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomB06g81410.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB06g82380.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB06g86170.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB06g86180.mRNA1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Bca_GomB07g60790.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomB07g60850.mRNA1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Bca_GomC01g14750.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomC01g14760.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomC01g22490.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomC01g56100.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Bca_GomC01g56110.mRNA1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH