PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
Reset
Gene Pathway Family Confidence Status
Bca_GomB01g03790.mRNA1 Flavonoid DFR medium borderline
Bca_GomB01g03940.mRNA1 Flavonoid DFR medium borderline
Bca_GomB01g21160.mRNA1 Flavonoid DFR low borderline
Bca_GomB02g102400.mRNA1 Flavonoid DFR low borderline
Bca_GomB02g92010.mRNA1 Flavonoid DFR low borderline
Bca_GomB03g35530.mRNA1 Flavonoid DFR medium borderline
Bca_GomB03g35800.mRNA1 Flavonoid DFR medium borderline
Bca_GomB04g10610.mRNA1 Flavonoid DFR medium borderline
Bca_GomB04g15730.mRNA1 Flavonoid DFR medium borderline
Bca_GomB04g16410.mRNA1 Flavonoid DFR medium borderline
Bca_GomB04g26250.mRNA1 Flavonoid DFR low borderline
Bca_GomB04g51130.mRNA1 Flavonoid DFR medium borderline
Bca_GomB05g22600.mRNA1 Flavonoid DFR medium borderline
Bca_GomB05g23200.mRNA1 Flavonoid DFR medium borderline
Bca_GomC01g06870.mRNA1 Flavonoid DFR medium borderline
Bca_GomC03g83170.mRNA1 Flavonoid DFR medium borderline
Bca_GomC06g51040.mRNA1 Flavonoid DFR low borderline
Bca_GomC06g54880.mRNA1 Flavonoid DFR medium borderline
Bca_GomC07g59650.mRNA1 Flavonoid DFR low borderline
Bca_GomC07g62240.mRNA1 Flavonoid DFR low borderline