PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Bca_GomB01g02910.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB01g03230.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB01g26750.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB01g36580.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB01g51010.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB01g73320.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB02g04100.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g13790.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g13960.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g14860.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB02g49690.mRNA2 Rosmarinic Acid RAS low borderline
Bca_GomB02g49960.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB02g62040.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g62320.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g77540.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g78670.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g96440.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB02g96950.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g13420.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g13890.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g39040.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g47700.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g68040.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g77810.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g79540.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB03g82920.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB04g07690.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB04g08790.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB04g11920.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB04g25460.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB04g41830.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB04g42530.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB04g52370.mRNA2 Rosmarinic Acid RAS medium pass
Bca_GomB05g02530.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB05g09030.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g13370.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g14200.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g14330.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g20590.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g20950.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g54290.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g84880.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB05g87220.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g15920.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g16280.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g17870.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g26360.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g26770.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g45300.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB06g55450.mRNA1 Rosmarinic Acid RAS low borderline