PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Bca_GomB01g27420.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB01g52290.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB01g67990.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB01g68010.mRNA1 Alkaloid LAMT medium pass
Bca_GomB02g18200.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g29630.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g31430.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g53230.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g53250.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g53280.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g97230.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB02g97460.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g00540.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g19990.mRNA1 Alkaloid LAMT medium pass
Bca_GomB03g20000.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g38370.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g38740.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g55960.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g56100.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g56120.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g58000.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB03g63030.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB04g74720.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g12960.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g23600.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g24150.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g48270.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g75640.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g75660.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g75670.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB05g75690.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g32970.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g53260.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g53270.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g73750.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g87340.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB06g87360.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB07g55840.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB07g55910.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB08g01220.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB08g04460.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB08g28760.mRNA1 Alkaloid LAMT low borderline
Bca_GomC01g04870.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC01g26330.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC01g30640.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC02g21300.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC02g21310.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC02g21320.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC02g21330.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC02g21340.mRNA1 Alkaloid LAMT medium borderline