PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g00700.mRNA1 Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Bca_GomB01g13310.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomB01g13340.mRNA1 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomB01g13360.mRNA1 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomB01g13410.mRNA1 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomB01g13440.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomB01g17260.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomB01g21900.mRNA1 Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Bca_GomB01g22450.mRNA1 Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Bca_GomB01g39140.mRNA1 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomB01g39710.mRNA1 Terpenoid UGT medium pass UGT__00095__sp_Q9LSY6_U71B6_ARATH
Bca_GomB01g39760.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomB01g39810.mRNA1 Terpenoid UGT medium pass UGT__00097__sp_Q9LSY9_U71B1_ARATH
Bca_GomB01g40010.mRNA1 Terpenoid UGT medium pass UGT__00100__sp_Q9LVF0_U84A2_ARATH
Bca_GomB01g44460.mRNA1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Bca_GomB01g52210.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomB01g52630.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomB01g60590.mRNA1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Bca_GomB01g62750.mRNA1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Bca_GomB02g00710.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomB02g00730.mRNA2 Terpenoid UGT medium pass UGT__00097__sp_Q9LSY9_U71B1_ARATH
Bca_GomB02g00750.mRNA1 Terpenoid UGT medium pass UGT__00097__sp_Q9LSY9_U71B1_ARATH
Bca_GomB02g04130.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomB02g04200.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomB02g106610.mRNA1 Terpenoid UGT medium pass UGT__00049__sp_O22820_U74F1_ARATH
Bca_GomB02g106620.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomB02g12090.mRNA1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Bca_GomB02g12700.mRNA1 Terpenoid UGT medium pass UGT__00046__sp_K4GMD6_73C9_BARVU
Bca_GomB02g14690.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomB02g15490.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomB02g19190.mRNA1 Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Bca_GomB02g28370.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomB02g34830.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomB02g43980.mRNA1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomB02g45390.mRNA1 Terpenoid UGT medium pass UGT__00045__sp_K4GKX2_73C10_BARVU
Bca_GomB02g51130.mRNA1 Terpenoid UGT medium borderline UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomB02g51140.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomB02g51150.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomB02g51160.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomB02g51170.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomB02g51180.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomB02g52820.mRNA1 Terpenoid UGT medium pass UGT__00107__sp_Q9SNB1_U7E11_ARATH
Bca_GomB02g56640.mRNA1 Terpenoid UGT medium pass UGT__00113__sp_Q9ZVY5_U75B2_ARATH
Bca_GomB02g58400.mRNA1 Terpenoid UGT medium pass UGT__00113__sp_Q9ZVY5_U75B2_ARATH
Bca_GomB02g77830.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomB02g77840.mRNA1 Terpenoid UGT low borderline UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomB02g77880.mRNA1 Terpenoid UGT medium pass UGT__00070__sp_Q5XF20_U84A1_ARATH
Bca_GomB02g78010.mRNA1 Terpenoid UGT medium pass UGT__00051__sp_O23382_U71B5_ARATH
Bca_GomB02g79060.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomB02g79070.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH