Bca_GomC04g08670.mRNA1 brassica_carinata
Protein ID: Bca_GomC04g08670.mRNA1
Record level: protein/isoform record
4
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Rosmarinic acid pathway
→
→
Family
RAS
→
Library
Rosmarinic acid Official Library
→
Method
blast+hmm_conflict
Pathway
Phenylpropanoid pathway
→
→
Family
HCT
→
Library
Phenylpropanoid Official Library
→
Method
blast+hmm
Pathway
Terpenoid pathway
→
Module
Terpenoid portable pathway
→
Family
BAHD
→
Library
Terpenoid Official Library
→
Method
blast
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
CYP80B1
→
Library
Alkaloid Official Library
→
Method
blast
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Rosmarinic acid pathway | Rosmarinic acid portable pathway | RAS | Rosmarinic acid Official Library | blast+hmm_conflict |
| Phenylpropanoid pathway | Phenylpropanoid portable pathway | HCT | Phenylpropanoid Official Library | blast+hmm |
| Terpenoid pathway | Terpenoid portable pathway | BAHD | Terpenoid Official Library | blast |
| Alkaloid pathway | Alkaloid portable pathway | CYP80B1 | Alkaloid Official Library | blast |
Protein Sequence
MVNKRRTWTVDNGVEVLGKQSNDKINGKENGKLTEMLESLLLRNDAVSKTGNKLEISSFQSLSALLWRAITRARKLPSTK TTTFRMAVNVRHRLSPKLDPEYFGNAIQSVPTFATAGEVLSRDIRWSADQLNQSVAAHQDGKIRDTVADWEANPRCFPLG NPDGASVTMGSSPRFPMYDNDFGWGKPVAVRSGRANKFDGKISAFPGRDGNGSVDLEVVLAPETMAGIETDGEFMRYVSK K