PlantSME Plant secondary metabolism enzyme database

fragaria_nubicola_evm.model.ctg119.352 fragaria_nubicola

Protein ID: fragaria_nubicola_evm.model.ctg119.352
Record level: protein/isoform record
Species：Fragaria nubicola (fragaria_nubicola)
2
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family SQE
→
Library Steroid Official Library
→
Method blast+hmm
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family TRI/TRII
→
Library Alkaloid Official Library
→
Method hmm
Annotation Details
Pathway Module Family Library Method
Steroid pathway Steroid portable pathway SQE Steroid Official Library blast+hmm
Alkaloid pathway Alkaloid portable pathway TRI/TRII Alkaloid Official Library hmm
Protein Sequence
MVVDQYLLAWIFASVIALIAVYGTVATRRSNNNRRASLEEEEERSRGCLTVSDAECRSADGDVDVIIVGAGVAGSALAHT
LGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNTRLSYPLEKFHSDVSGRS
FHNGRFIQRMRDKAAALPNVQLEQGTVTSLLEEKGTIKGVQYKTKTGQEMTAYAPLTIVCDGCFSNLRRSLCDPKVDVPS
CFVGLILENCDLPHANHGHVILADPSPILFYQISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPPQIYDAFVAV
VDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLLRPLCTLNDAPTLSKYLESFYTLRK
PVASTINTLAGALYKVFSSSPDQARTEMRQACFDYLSLGGVFSMGPVSLLSGLNPRPLSLVTHFFAVAVYGVGRLLLPFP
SPKRLWIGARLISSASGIIFPIIKAEGVRQMFFPATVPAYYRTPVSSEKMRKKDDGRIADDK*