PlantSME Plant secondary metabolism enzyme database

gynandropsis_gynandra_Gyn_10X_HIC_v5_00020707.mRNA1 gynandropsis_gynandra

Protein ID: gynandropsis_gynandra_Gyn_10X_HIC_v5_00020707.mRNA1
Record level: protein/isoform record
Species：Gynandropsis gynandra (gynandropsis_gynandra)
2
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family SQE
→
Library Steroid Official Library
→
Method blast+hmm
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family TRI/TRII
→
Library Alkaloid Official Library
→
Method hmm
Annotation Details
Pathway Module Family Library Method
Steroid pathway Steroid portable pathway SQE Steroid Official Library blast+hmm
Alkaloid pathway Alkaloid portable pathway TRI/TRII Alkaloid Official Library hmm
Protein Sequence
MLTGERLSSSCVWIWTLPVVVLTWMVFHVAKKQRHNTVETAAVTETTDGADIIIVGAGVAGSALAYTLAKEGRHVHLIER
DLSELDRMMGEVMQPGGRVMLAELGLEDCLEEIDAQKMTALAVYKDGKHSHLPFPQHEKFPYGTLACGFHNGRFVQRLRQ
KASSHPNVNLEEGTVKSLVEEGGVIKGVKYKIKNSGEETTAFAPLTVVCDGAYSNLRRSLIDPKVAVHSYQIGYITKNCQ
LKDPESFHLIMSEPSFSMMYHIGSDEVRCLAEVLPENVPSVANCEAIAFLKNVIAPQVPPTMRDIFLKGLDENAEIKTVA
TRSMRDSLSDKKGVIVLGDAFNMRHPIIASGMMVALSDIVVLRDLLKSLNNFNDAKKLSKVLKSFHKLRKPMSATVNTLA
DAFHRVLLASNDEAREAMRQGSFNYMCRGGICTTGMMALFGGLNPKPLSLIIHLFGITCASIATLLSPFPTLHGIWQALR
LLQLSLAMLISHLKEEGVVQMLSPAAATAYSKRYMTATVA