PlantSME Plant secondary metabolism enzyme database

Acer truncatum (acer_truncatum)

Imported from atlas release summary for Acer truncatum.

1432
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.05% Alkaloid pathway 22.14% Phenylpropanoid pathway 19.76% Flavonoid pathway 14.66% Rosmarinic acid pathway 7.54% Steroid pathway 6.84%
Family Distribution
C4H 5.87% BAHD 5.52% C3'H/CYP98A 5.37% 4CL 4.81% UGT 4.75% IFS 4.06% 7DLGT 3.89% UFGT 3.77%
Other Families 61.97%
More Families (97)
POD 119 3.53% T3O 117 3.47% CYP76 110 3.26% F3H 84 2.49% DWF4/CYP90B1 84 2.49% NMT 75 2.22% CODM/T6ODM 56 1.66% CAD 56 1.66% STR 54 1.6% F3'H/CYP75B 52 1.54% CYP71 52 1.54% SMT1/SMT2/SMT3 50 1.48% H6H 46 1.36% IFR 43 1.28% PYKS 42 1.25% CAS 40 1.19% LAC 37 1.1% TRI/TRII 36 1.07% CYP90D1 36 1.07% TPS 35 1.04% GS 33 0.98% BR6OX2/CYP85A2 33 0.98% COMT 31 0.92% SGD 30 0.89% GES 29 0.86% BBE 28 0.83% CSE 28 0.83% 16OMT 25 0.74% HCT 24 0.71% TAT 24 0.71% G8O/G8H 23 0.68% DFR 21 0.62% CCR 21 0.62% BR6OX1/CYP85A1 20 0.59% T16H 19 0.56% FNS 19 0.56% SLS 18 0.53% ANS/LDOX 18 0.53% F5H/CYP84A 18 0.53% CPD/CYP90A1 18 0.53% F3'5'H/CYP75A 17 0.5% RAS 17 0.5% PMT 16 0.47% CYP51G1 16 0.47% IO 15 0.44% 7DLH 15 0.44% ANR 15 0.44% SQS/FDFT1 15 0.44% LAMT 14 0.42% MPO 12 0.36% PAL 12 0.36% NCS 11 0.33% COR 11 0.33% 8HGO 11 0.33% FPPS 11 0.33% CNMT 10 0.3% CHS 10 0.3% SQE 10 0.3% GGPPS 10 0.3% DET2 9 0.27% DXS 9 0.27% CYP719 8 0.24% CCoAOMT 8 0.24% CPR 8 0.24% ROT3/CYP90C1 7 0.21% AACT 7 0.21% XMT_MXMT_DXMT 6 0.18% CYP80B1 6 0.18% ISY 6 0.18% MCT/IspD 5 0.15% FLS 4 0.12% CHI 4 0.12% MVD 4 0.12% HMGR 4 0.12% TYDC_DDC 3 0.09% 6OMT_4OMT_SOMT 3 0.09% SMO1/SMO2 3 0.09% MVK 3 0.09% ODC 2 0.06% TDC 2 0.06% ADC 2 0.06% HPPR 2 0.06% DWF1 2 0.06% HYD1 2 0.06% FK 2 0.06% CMK/IspE 2 0.06% HDS/IspG 2 0.06% HMGS 2 0.06% PMK 2 0.06% DWF7 1 0.03% DWF5 1 0.03% CPI1 1 0.03% GPPS 1 0.03% IDI 1 0.03% HDR/IspH 1 0.03% MDS/IspF 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 416 18 BAHD (149) View species results
Alkaloid pathway 317 24 7DLGT (56) View species results
Phenylpropanoid pathway 283 12 POD (101) View species results
Flavonoid pathway 210 12 UFGT (120) View species results
Rosmarinic acid pathway 108 7 4CL (40) View species results
Steroid pathway 98 11 CAS (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1200 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 227 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
acer_truncatum_Atru.chr1.143 Alkaloid PMT medium borderline
acer_truncatum_Atru.chr12.89 Alkaloid PMT low borderline
acer_truncatum_Atru.chr13.416 Alkaloid PMT low borderline
acer_truncatum_Atru.chr2.1291 Alkaloid PMT medium pass
acer_truncatum_Atru.chr2.1292 Alkaloid PMT medium pass
acer_truncatum_Atru.chr3.1978 Alkaloid PMT low borderline
acer_truncatum_Atru.chr3.2786 Alkaloid PMT medium pass
acer_truncatum_Atru.chr3.2791.1 Alkaloid PMT low borderline
acer_truncatum_Atru.chr4.2497 Alkaloid PMT medium pass
acer_truncatum_Atru.chr5.876 Alkaloid PMT medium pass
acer_truncatum_Atru.chr6.1859 Alkaloid PMT medium pass
acer_truncatum_Atru.chr6.212 Alkaloid PMT low borderline
acer_truncatum_Atru.chr6.2603 Alkaloid PMT medium pass
acer_truncatum_Atru.chr7.1861 Alkaloid PMT medium pass
acer_truncatum_Atru.chr7.829 Alkaloid PMT low borderline
acer_truncatum_Atru.chr9.2440_Atru.chr9.2441 Alkaloid PMT medium borderline