PlantSME Plant secondary metabolism enzyme database

Acorus gramineus (acorus_gramineus)

Imported from atlas release summary for Acorus gramineus.

1149
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.46% Phenylpropanoid pathway 24.02% Alkaloid pathway 22.37% Flavonoid pathway 11.84% Rosmarinic acid pathway 9.14% Steroid pathway 6.18%
Family Distribution
C4H 6.88% C3'H/CYP98A 6.56% BAHD 5.31% POD 4.63% CYP76 4.17% 4CL 4.06% IFS 4.06% T3O 3.92%
Other Families 60.42%
More Families (95)
UGT 79 2.81% UFGT 77 2.74% 7DLGT 75 2.67% NMT 64 2.28% BR6OX2/CYP85A2 63 2.24% F3H 61 2.17% DWF4/CYP90B1 57 2.03% F3'H/CYP75B 56 2.0% STR 49 1.75% CAD 46 1.64% SMT1/SMT2/SMT3 44 1.57% TRI/TRII 41 1.46% COMT 39 1.39% CYP71 39 1.39% TPS 39 1.39% GES 38 1.35% CAS 36 1.28% PYKS 34 1.21% IFR 33 1.18% CODM/T6ODM 32 1.14% 16OMT 29 1.03% LAC 29 1.03% CSE 27 0.96% G8O/G8H 24 0.86% GS 24 0.86% CYP90D1 23 0.82% IO 21 0.75% T16H 20 0.71% CPD/CYP90A1 20 0.71% FNS 19 0.68% NCS 18 0.64% H6H 18 0.64% CNMT 18 0.64% 8HGO 18 0.64% RAS 18 0.64% SGD 17 0.61% 7DLH 16 0.57% ANR 16 0.57% HCT 16 0.57% PAL 15 0.53% CCR 15 0.53% COR 14 0.5% F5H/CYP84A 14 0.5% BR6OX1/CYP85A1 14 0.5% TAT 13 0.46% LAMT 12 0.43% SLS 12 0.43% PMT 12 0.43% F3'5'H/CYP75A 11 0.39% CHS 11 0.39% CYP51G1 11 0.39% ROT3/CYP90C1 9 0.32% CYP719 8 0.29% CPR 8 0.29% GGPPS 7 0.25% CCoAOMT 6 0.21% DXS 6 0.21% AACT 6 0.21% MPO 5 0.18% ANS/LDOX 5 0.18% DFR 5 0.18% SQE 5 0.18% MVK 5 0.18% BBE 4 0.14% TYDC_DDC 4 0.14% CYP80B1 4 0.14% SQS/FDFT1 4 0.14% SMO1/SMO2 4 0.14% MCT/IspD 4 0.14% FPPS 4 0.14% MVD 4 0.14% 6OMT_4OMT_SOMT 3 0.11% XMT_MXMT_DXMT 3 0.11% ISY 3 0.11% CHI 3 0.11% DET2 3 0.11% HDR/IspH 3 0.11% TDC 2 0.07% HPPR 2 0.07% DWF7 2 0.07% HMGR 2 0.07% HMGS 2 0.07% MDS/IspF 2 0.07% ADC 1 0.04% FLS 1 0.04% CPI1 1 0.04% FK 1 0.04% DWF5 1 0.04% DWF1 1 0.04% HYD1 1 0.04% CMK/IspE 1 0.04% HDS/IspG 1 0.04% IDI 1 0.04% DXR 1 0.04% PMK 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 304 19 BAHD (109) View species results
Phenylpropanoid pathway 276 12 POD (123) View species results
Alkaloid pathway 257 20 T3O (38) View species results
Flavonoid pathway 136 9 UFGT (71) View species results
Rosmarinic acid pathway 105 7 C4H (53) View species results
Steroid pathway 71 13 SMT1/SMT2/SMT3 (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1140 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 183 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status Best Target
acorus_gramineus_AGRA_01272 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_02686 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_08321 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_08422 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_10020 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_10735 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_11389 Steroid ROT3/CYP90C1 medium pass ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_18404 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
acorus_gramineus_AGRA_22363 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH