PlantSME Plant secondary metabolism enzyme database

Actinidia hemsleyana (actinidia_hemsleyana)

Imported from atlas release summary for Actinidia hemsleyana.

1878
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 33.28% Alkaloid pathway 22.84% Phenylpropanoid pathway 20.34% Flavonoid pathway 10.38% Rosmarinic acid pathway 7.35% Steroid pathway 5.8%
Family Distribution
C4H 6.09% BAHD 5.54% C3'H/CYP98A 5.38% UGT 4.49% POD 4.12% IFS 3.63% F3H 3.43% 4CL 3.41%
Other Families 63.91%
More Families (98)
CYP76 164 3.33% 7DLGT 162 3.29% T3O 144 2.92% UFGT 140 2.84% NMT 122 2.48% DWF4/CYP90B1 114 2.31% CODM/T6ODM 108 2.19% H6H 98 1.99% F3'H/CYP75B 96 1.95% STR 91 1.85% CAD 81 1.64% LAC 79 1.6% BR6OX2/CYP85A2 79 1.6% CYP71 76 1.54% CAS 65 1.32% TRI/TRII 61 1.24% T16H 52 1.06% PYKS 52 1.06% IFR 51 1.04% G8O/G8H 45 0.91% SMT1/SMT2/SMT3 44 0.89% TPS 43 0.87% GS 42 0.85% IO 41 0.83% GES 41 0.83% CYP90D1 41 0.83% HCT 40 0.81% FNS 39 0.79% BBE 38 0.77% CSE 37 0.75% 7DLH 34 0.69% PMT 34 0.69% SGD 32 0.65% RAS 32 0.65% CPD/CYP90A1 31 0.63% COR 29 0.59% ANR 29 0.59% ANS/LDOX 29 0.59% F5H/CYP84A 29 0.59% BR6OX1/CYP85A1 29 0.59% F3'5'H/CYP75A 28 0.57% CCR 28 0.57% SLS 27 0.55% NCS 25 0.51% PAL 24 0.49% COMT 23 0.47% DFR 22 0.45% MPO 21 0.43% ROT3/CYP90C1 20 0.41% LAMT 17 0.35% TAT 16 0.32% 8HGO 15 0.3% 16OMT 15 0.3% CPR 15 0.3% CYP80B1 13 0.26% CNMT 12 0.24% GGPPS 12 0.24% CCoAOMT 11 0.22% SQS/FDFT1 11 0.22% DXS 11 0.22% AACT 11 0.22% ISY 9 0.18% CHS 9 0.18% FLS 9 0.18% CHI 9 0.18% SQE 9 0.18% CYP51G1 9 0.18% DET2 8 0.16% HMGR 8 0.16% CYP80F1 7 0.14% FPPS 7 0.14% MVD 7 0.14% XMT_MXMT_DXMT 6 0.12% CYP719 6 0.12% HPPR 6 0.12% SMO1/SMO2 6 0.12% TYDC_DDC 5 0.1% PMK 5 0.1% MCT/IspD 5 0.1% MVK 5 0.1% IDI 5 0.1% TDC 4 0.08% HDR/IspH 4 0.08% DXR 4 0.08% DWF7 3 0.06% HMGS 3 0.06% ODC 2 0.04% ADC 2 0.04% HYD1 2 0.04% DWF5 2 0.04% FK 2 0.04% GPPS 2 0.04% HDS/IspG 2 0.04% MDS/IspF 2 0.04% 6OMT_4OMT_SOMT 1 0.02% CPI1 1 0.02% DWF1 1 0.02% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 625 19 BAHD (225) View species results
Alkaloid pathway 429 24 NMT (67) View species results
Phenylpropanoid pathway 382 13 POD (176) View species results
Flavonoid pathway 195 12 UFGT (102) View species results
Rosmarinic acid pathway 138 7 C4H (50) View species results
Steroid pathway 109 12 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1829 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 345 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
actinidia_hemsleyana_GWHPCBQA015130 Terpenoid IDI medium pass
actinidia_hemsleyana_GWHPCBQA035287 Terpenoid IDI medium pass
actinidia_hemsleyana_GWHPCBQA035288 Terpenoid IDI medium pass
actinidia_hemsleyana_GWHPCBQA038218 Terpenoid IDI medium pass
actinidia_hemsleyana_GWHPCBQA038899 Terpenoid IDI low borderline