PlantSME Plant secondary metabolism enzyme database

Aegiceras corniculatum (aegiceras_corniculatum)

Imported from atlas release summary for Aegiceras corniculatum.

1707
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.17% Alkaloid pathway 22.32% Phenylpropanoid pathway 19.45% Flavonoid pathway 14.53% Rosmarinic acid pathway 7.62% Steroid pathway 5.92%
Family Distribution
C4H 6.34% C3'H/CYP98A 5.35% BAHD 5.33% UGT 4.32% 4CL 4.12% 7DLGT 3.87% UFGT 3.73% IFS 3.4%
Other Families 63.55%
More Families (97)
POD 148 3.33% T3O 146 3.28% CYP76 136 3.06% F3H 112 2.52% NMT 104 2.34% DWF4/CYP90B1 101 2.27% F3'H/CYP75B 87 1.96% CODM/T6ODM 84 1.89% BR6OX2/CYP85A2 77 1.73% STR 70 1.57% TPS 68 1.53% CAD 66 1.48% COMT 63 1.42% CAS 63 1.42% H6H 59 1.33% CYP71 59 1.33% IO 49 1.1% TRI/TRII 47 1.06% GS 46 1.03% SMT1/SMT2/SMT3 46 1.03% GES 45 1.01% IFR 45 1.01% PYKS 43 0.97% F5H/CYP84A 43 0.97% CYP90D1 42 0.94% F3'5'H/CYP75A 37 0.83% LAC 37 0.83% G8O/G8H 35 0.79% FNS 34 0.76% 16OMT 33 0.74% HCT 33 0.74% T16H 32 0.72% CSE 32 0.72% SLS 31 0.7% 7DLH 27 0.61% TAT 27 0.61% SGD 26 0.58% CCR 25 0.56% CHS 23 0.52% DFR 22 0.49% BR6OX1/CYP85A1 22 0.49% ANR 21 0.47% 8HGO 20 0.45% COR 20 0.45% NCS 20 0.45% ANS/LDOX 20 0.45% ROT3/CYP90C1 20 0.45% CPD/CYP90A1 19 0.43% PMT 18 0.4% PAL 18 0.4% CPR 18 0.4% RAS 17 0.38% AACT 16 0.36% SQS/FDFT1 15 0.34% DET2 14 0.31% LAMT 13 0.29% CYP719 12 0.27% 6OMT_4OMT_SOMT 11 0.25% MPO 11 0.25% CCoAOMT 10 0.22% DXS 10 0.22% TYDC_DDC 9 0.2% BBE 9 0.2% CHI 9 0.2% HPPR 9 0.2% CYP51G1 9 0.2% FPPS 9 0.2% CNMT 8 0.18% GGPPS 8 0.18% CYP80B1 7 0.16% SMO1/SMO2 7 0.16% HMGR 7 0.16% ODC 6 0.13% HDR/IspH 6 0.13% HMGS 6 0.13% CYP80F1 5 0.11% MVK 5 0.11% MCT/IspD 5 0.11% TDC 4 0.09% FLS 4 0.09% DWF7 4 0.09% MVD 4 0.09% DXR 4 0.09% ISY 3 0.07% XMT_MXMT_DXMT 3 0.07% SQE 3 0.07% DWF5 3 0.07% FK 3 0.07% PMK 3 0.07% MDS/IspF 3 0.07% CMK/IspE 3 0.07% CPI1 2 0.04% HYD1 2 0.04% HDS/IspG 2 0.04% IDI 2 0.04% ADC 1 0.02% DWF1 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 515 20 BAHD (179) View species results
Alkaloid pathway 381 26 7DLGT (61) View species results
Phenylpropanoid pathway 332 11 POD (129) View species results
Flavonoid pathway 248 12 UFGT (151) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 101 13 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1667 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 287 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
Acor15G0009100.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor15G0009110.1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor15G0009120.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor16G0006540.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor16G0010690.1 Phenylpropanoid CAD low borderline CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
Acor16G0013460.1 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
Acor20G0004520.1 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Acor20G0008480.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Acor22G0000520.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor22G0000550.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor22G0001090.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor22G0001110.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Acor23G0002570.1 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Acor24G0002280.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Acortig00003189_pilon0003940.1 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
Acortig00003331_pilon0004780.1 Phenylpropanoid CAD low borderline CAD__00016__sp_Q9SJ10_CADH3_ARATH