PlantSME Plant secondary metabolism enzyme database

Aegiceras corniculatum (aegiceras_corniculatum)

Imported from atlas release summary for Aegiceras corniculatum.

1707
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.17% Alkaloid pathway 22.32% Phenylpropanoid pathway 19.45% Flavonoid pathway 14.53% Rosmarinic acid pathway 7.62% Steroid pathway 5.92%
Family Distribution
C4H 6.34% C3'H/CYP98A 5.35% BAHD 5.33% UGT 4.32% 4CL 4.12% 7DLGT 3.87% UFGT 3.73% IFS 3.4%
Other Families 63.55%
More Families (97)
POD 148 3.33% T3O 146 3.28% CYP76 136 3.06% F3H 112 2.52% NMT 104 2.34% DWF4/CYP90B1 101 2.27% F3'H/CYP75B 87 1.96% CODM/T6ODM 84 1.89% BR6OX2/CYP85A2 77 1.73% STR 70 1.57% TPS 68 1.53% CAD 66 1.48% COMT 63 1.42% CAS 63 1.42% H6H 59 1.33% CYP71 59 1.33% IO 49 1.1% TRI/TRII 47 1.06% GS 46 1.03% SMT1/SMT2/SMT3 46 1.03% GES 45 1.01% IFR 45 1.01% PYKS 43 0.97% F5H/CYP84A 43 0.97% CYP90D1 42 0.94% F3'5'H/CYP75A 37 0.83% LAC 37 0.83% G8O/G8H 35 0.79% FNS 34 0.76% 16OMT 33 0.74% HCT 33 0.74% T16H 32 0.72% CSE 32 0.72% SLS 31 0.7% 7DLH 27 0.61% TAT 27 0.61% SGD 26 0.58% CCR 25 0.56% CHS 23 0.52% DFR 22 0.49% BR6OX1/CYP85A1 22 0.49% ANR 21 0.47% 8HGO 20 0.45% COR 20 0.45% NCS 20 0.45% ANS/LDOX 20 0.45% ROT3/CYP90C1 20 0.45% CPD/CYP90A1 19 0.43% PMT 18 0.4% PAL 18 0.4% CPR 18 0.4% RAS 17 0.38% AACT 16 0.36% SQS/FDFT1 15 0.34% DET2 14 0.31% LAMT 13 0.29% CYP719 12 0.27% 6OMT_4OMT_SOMT 11 0.25% MPO 11 0.25% CCoAOMT 10 0.22% DXS 10 0.22% TYDC_DDC 9 0.2% BBE 9 0.2% CHI 9 0.2% HPPR 9 0.2% CYP51G1 9 0.2% FPPS 9 0.2% CNMT 8 0.18% GGPPS 8 0.18% CYP80B1 7 0.16% SMO1/SMO2 7 0.16% HMGR 7 0.16% ODC 6 0.13% HDR/IspH 6 0.13% HMGS 6 0.13% CYP80F1 5 0.11% MVK 5 0.11% MCT/IspD 5 0.11% TDC 4 0.09% FLS 4 0.09% DWF7 4 0.09% MVD 4 0.09% DXR 4 0.09% ISY 3 0.07% XMT_MXMT_DXMT 3 0.07% SQE 3 0.07% DWF5 3 0.07% FK 3 0.07% PMK 3 0.07% MDS/IspF 3 0.07% CMK/IspE 3 0.07% CPI1 2 0.04% HYD1 2 0.04% HDS/IspG 2 0.04% IDI 2 0.04% ADC 1 0.02% DWF1 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 515 20 BAHD (179) View species results
Alkaloid pathway 381 26 7DLGT (61) View species results
Phenylpropanoid pathway 332 11 POD (129) View species results
Flavonoid pathway 248 12 UFGT (151) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 101 13 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1667 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 287 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
Acor01G0019520.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Acor07G0001310.1 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Acor15G0015730.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Acor22G0001680.1 Terpenoid FPPS low borderline FPPS__00006__sp_P49350_FPPS_ARTAN
Acortig00002238_pilon0000800.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Acortig00003249_pilon0004280.1 Terpenoid FPPS medium borderline FPPS__00011__sp_Q9SLG2_GGPP4_ARATH
Acortig00004568_pilon0007820.1 Terpenoid FPPS low borderline FPPS__00006__sp_P49350_FPPS_ARTAN
Acortig00006593_pilon_385000_5329990012820.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Acortig00006593_pilon_533000_5449990012830.1 Terpenoid FPPS medium pass FPPS__00006__sp_P49350_FPPS_ARTAN