PlantSME Plant secondary metabolism enzyme database

Aerobryopsis subdivergens (aerobryopsis_subdivergens)

Imported from atlas release summary for Aerobryopsis subdivergens.

734
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 27.79% Terpenoid pathway 23.84% Alkaloid pathway 17.71% Flavonoid pathway 13.76% Rosmarinic acid pathway 11.85% Steroid pathway 5.04%
Family Distribution
C4H 6.98% C3'H/CYP98A 6.41% POD 5.22% CYP76 4.96% BAHD 4.81% 4CL 4.5% IFS 3.21% PAL 3.21%
Other Families 60.7%
More Families (94)
NMT 61 3.15% BR6OX2/CYP85A2 50 2.59% T3O 49 2.53% DWF4/CYP90B1 49 2.53% F3'H/CYP75B 47 2.43% F3H 42 2.17% GS 41 2.12% STR 40 2.07% IFR 38 1.96% 7DLGT 36 1.86% UGT 36 1.86% PYKS 35 1.81% UFGT 34 1.76% IO 33 1.71% CODM/T6ODM 27 1.4% CHS 25 1.29% COMT 25 1.29% F3'5'H/CYP75A 24 1.24% CAD 22 1.14% SLS 19 0.98% SMT1/SMT2/SMT3 19 0.98% CYP71 19 0.98% G8O/G8H 18 0.93% CSE 18 0.93% CAS 18 0.93% CYP90D1 18 0.93% TRI/TRII 17 0.88% H6H 14 0.72% 16OMT 14 0.72% 7DLH 14 0.72% RAS 14 0.72% NCS 12 0.62% CYP80B1 12 0.62% CPD/CYP90A1 12 0.62% HCT 10 0.52% 8HGO 9 0.47% LAC 9 0.47% BBE 7 0.36% SGD 7 0.36% COR 7 0.36% MPO 7 0.36% FNS 7 0.36% F5H/CYP84A 7 0.36% DWF5 7 0.36% T16H 6 0.31% ANR 6 0.31% SQS/FDFT1 6 0.31% CNMT 5 0.26% CCR 5 0.26% CPR 5 0.26% TAT 5 0.26% AACT 5 0.26% GGPPS 5 0.26% TDC 4 0.21% LAMT 4 0.21% PMT 4 0.21% CHI 4 0.21% DET2 4 0.21% ROT3/CYP90C1 4 0.21% MVK 4 0.21% GES 3 0.16% 6OMT_4OMT_SOMT 3 0.16% ADC 3 0.16% DFR 3 0.16% FLS 3 0.16% SQE 3 0.16% HYD1 3 0.16% BR6OX1/CYP85A1 3 0.16% MVD 3 0.16% DXR 3 0.16% TPS 3 0.16% TYDC_DDC 2 0.1% CYP719 2 0.1% CCoAOMT 2 0.1% HPPR 2 0.1% DWF1 2 0.1% SMO1/SMO2 2 0.1% FK 2 0.1% MDS/IspF 2 0.1% HDS/IspG 2 0.1% MCT/IspD 2 0.1% FPPS 2 0.1% HDR/IspH 2 0.1% DXS 2 0.1% XMT_MXMT_DXMT 1 0.05% ISY 1 0.05% CYP51G1 1 0.05% DWF7 1 0.05% CPI1 1 0.05% CMK/IspE 1 0.05% PMK 1 0.05% HMGS 1 0.05% HMGR 1 0.05% IDI 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 204 10 POD (95) View species results
Terpenoid pathway 175 19 BAHD (57) View species results
Alkaloid pathway 130 17 NMT (25) View species results
Flavonoid pathway 101 9 UFGT (31) View species results
Rosmarinic acid pathway 87 7 C4H (40) View species results
Steroid pathway 37 12 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 804 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 117 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Asubscaffold_170200400 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Asubscaffold_180219900 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Asubscaffold_180220690 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Asubscaffold_180220760 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
Asubscaffold_180226220 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Asubscaffold_180230110 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Asubscaffold_420258360 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Asubscaffold_80261680 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Asubscaffold_90270170 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Asubscaffold_90276940 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Asubscaffold_90279190 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH