PlantSME Plant secondary metabolism enzyme database

Aerobryopsis subdivergens (aerobryopsis_subdivergens)

Imported from atlas release summary for Aerobryopsis subdivergens.

734
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 27.79% Terpenoid pathway 23.84% Alkaloid pathway 17.71% Flavonoid pathway 13.76% Rosmarinic acid pathway 11.85% Steroid pathway 5.04%
Family Distribution
C4H 6.98% C3'H/CYP98A 6.41% POD 5.22% CYP76 4.96% BAHD 4.81% 4CL 4.5% IFS 3.21% PAL 3.21%
Other Families 60.7%
More Families (94)
NMT 61 3.15% BR6OX2/CYP85A2 50 2.59% T3O 49 2.53% DWF4/CYP90B1 49 2.53% F3'H/CYP75B 47 2.43% F3H 42 2.17% GS 41 2.12% STR 40 2.07% IFR 38 1.96% 7DLGT 36 1.86% UGT 36 1.86% PYKS 35 1.81% UFGT 34 1.76% IO 33 1.71% CODM/T6ODM 27 1.4% CHS 25 1.29% COMT 25 1.29% F3'5'H/CYP75A 24 1.24% CAD 22 1.14% SLS 19 0.98% SMT1/SMT2/SMT3 19 0.98% CYP71 19 0.98% G8O/G8H 18 0.93% CSE 18 0.93% CAS 18 0.93% CYP90D1 18 0.93% TRI/TRII 17 0.88% H6H 14 0.72% 16OMT 14 0.72% 7DLH 14 0.72% RAS 14 0.72% NCS 12 0.62% CYP80B1 12 0.62% CPD/CYP90A1 12 0.62% HCT 10 0.52% 8HGO 9 0.47% LAC 9 0.47% BBE 7 0.36% SGD 7 0.36% COR 7 0.36% MPO 7 0.36% FNS 7 0.36% F5H/CYP84A 7 0.36% DWF5 7 0.36% T16H 6 0.31% ANR 6 0.31% SQS/FDFT1 6 0.31% CNMT 5 0.26% CCR 5 0.26% CPR 5 0.26% TAT 5 0.26% AACT 5 0.26% GGPPS 5 0.26% TDC 4 0.21% LAMT 4 0.21% PMT 4 0.21% CHI 4 0.21% DET2 4 0.21% ROT3/CYP90C1 4 0.21% MVK 4 0.21% GES 3 0.16% 6OMT_4OMT_SOMT 3 0.16% ADC 3 0.16% DFR 3 0.16% FLS 3 0.16% SQE 3 0.16% HYD1 3 0.16% BR6OX1/CYP85A1 3 0.16% MVD 3 0.16% DXR 3 0.16% TPS 3 0.16% TYDC_DDC 2 0.1% CYP719 2 0.1% CCoAOMT 2 0.1% HPPR 2 0.1% DWF1 2 0.1% SMO1/SMO2 2 0.1% FK 2 0.1% MDS/IspF 2 0.1% HDS/IspG 2 0.1% MCT/IspD 2 0.1% FPPS 2 0.1% HDR/IspH 2 0.1% DXS 2 0.1% XMT_MXMT_DXMT 1 0.05% ISY 1 0.05% CYP51G1 1 0.05% DWF7 1 0.05% CPI1 1 0.05% CMK/IspE 1 0.05% PMK 1 0.05% HMGS 1 0.05% HMGR 1 0.05% IDI 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 204 10 POD (95) View species results
Terpenoid pathway 175 19 BAHD (57) View species results
Alkaloid pathway 130 17 NMT (25) View species results
Flavonoid pathway 101 9 UFGT (31) View species results
Rosmarinic acid pathway 87 7 C4H (40) View species results
Steroid pathway 37 12 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 804 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 117 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status Best Target
Asubscaffold_100005350 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Asubscaffold_10001010 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00002__sp_H2E7T9_SMTL2_BOTBR
Asubscaffold_100028770 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_110056840 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_130100900 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_130102400 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Asubscaffold_130132480 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_150164600 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_150175200 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00001__sp_H2E7T8_SMTL1_BOTBR
Asubscaffold_160183600 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_160185440 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_160191930 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_160191950 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_160195770 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_170212890 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Asubscaffold_170213530 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_180226600 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_180252550 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Asubscaffold_90270170 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH