PlantSME Plant secondary metabolism enzyme database

Anthoceros agrestis Bonn (anthoceros_agrestis_bonn)

Imported from atlas release summary for Anthoceros agrestis Bonn.

648
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 24.85% Alkaloid pathway 24.69% Phenylpropanoid pathway 20.83% Rosmarinic acid pathway 12.96% Steroid pathway 9.57% Flavonoid pathway 7.1%
Family Distribution
C4H 9.48% C3'H/CYP98A 8.98% CYP76 6.49% IFS 5.85% T3O 5.13% DWF4/CYP90B1 4.22% BAHD 4.04% POD 3.58%
Other Families 52.22%
More Families (96)
4CL 78 3.54% BR6OX2/CYP85A2 68 3.09% NMT 62 2.81% F3'H/CYP75B 45 2.04% F3'5'H/CYP75A 43 1.95% G8O/G8H 36 1.63% F3H 35 1.59% H6H 33 1.5% IO 33 1.5% CAS 32 1.45% STR 31 1.41% SMT1/SMT2/SMT3 31 1.41% TPS 29 1.32% IFR 27 1.23% GES 26 1.18% T16H 25 1.13% TRI/TRII 22 1.0% BR6OX1/CYP85A1 22 1.0% SLS 20 0.91% GS 18 0.82% FNS 17 0.77% F5H/CYP84A 17 0.77% COMT 17 0.77% CPD/CYP90A1 17 0.77% CODM/T6ODM 16 0.73% LAMT 15 0.68% CYP90D1 15 0.68% CYP71 14 0.64% 7DLH 12 0.54% PYKS 12 0.54% ROT3/CYP90C1 12 0.54% ADC 11 0.5% SGD 11 0.5% 16OMT 10 0.45% COR 9 0.41% CHI 9 0.41% CAD 9 0.41% CSE 9 0.41% CYP51G1 9 0.41% CYP719 8 0.36% CCR 8 0.36% LAC 8 0.36% RAS 8 0.36% TAT 8 0.36% ANR 7 0.32% ANS/LDOX 7 0.32% HCT 7 0.32% CPR 7 0.32% 8HGO 6 0.27% XMT_MXMT_DXMT 6 0.27% CHS 6 0.27% PAL 6 0.27% CNMT 5 0.23% NCS 4 0.18% CYP80B1 4 0.18% PMT 4 0.18% ISY 4 0.18% HPPR 4 0.18% SQS/FDFT1 4 0.18% SMO1/SMO2 4 0.18% MVD 4 0.18% AACT 4 0.18% TDC 3 0.14% ODC 3 0.14% DFR 3 0.14% DWF1 3 0.14% CPI1 3 0.14% DET2 3 0.14% GGPPS 3 0.14% FPPS 3 0.14% MCT/IspD 3 0.14% TYDC_DDC 2 0.09% UFGT 2 0.09% FK 2 0.09% SQE 2 0.09% HDS/IspG 2 0.09% DXS 2 0.09% MVK 2 0.09% HMGS 2 0.09% CMK/IspE 2 0.09% BBE 1 0.05% MPO 1 0.05% CYP80F1 1 0.05% 6OMT_4OMT_SOMT 1 0.05% FLS 1 0.05% CCoAOMT 1 0.05% DWF5 1 0.05% DWF7 1 0.05% HYD1 1 0.05% DXR 1 0.05% MDS/IspF 1 0.05% HDR/IspH 1 0.05% IDI 1 0.05% HMGR 1 0.05% UGT 1 0.05% PMK 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 161 19 BAHD (54) View species results
Alkaloid pathway 160 19 T3O (60) View species results
Phenylpropanoid pathway 135 11 POD (75) View species results
Rosmarinic acid pathway 84 7 C4H (60) View species results
Steroid pathway 62 14 CAS (31) View species results
Flavonoid pathway 46 8 IFR (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1286 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 104 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
AagrBONNSc2ySwM_117G0004370 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0008370 Alkaloid STR medium pass STR__00002__sp_P68175_STSY_RAUSE
AagrBONNSc2ySwM_117G0012670 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0018990 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0019000 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0019050 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0019060 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0033580 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0037490 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_117G0037500 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_228G0024770 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_228G0028470 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AagrBONNSc2ySwM_228G0050250 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_3390003420 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004240 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004260 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004270 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004280 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004290 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_340G0004340 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_344G0013060 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_344G0013670 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_344G0022320 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_344G0031600 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_344G0047380 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_362G0002490 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AagrBONNSc2ySwM_362G0010400 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_362G0026210 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_368G0015630 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
AagrBONNSc2ySwM_368G0016690 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AagrBONNSc2ySwM_369G0004950 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR