PlantSME Plant secondary metabolism enzyme database

Anthoceros agrestis Oxford (anthoceros_agrestis_oxford)

Imported from atlas release summary for Anthoceros agrestis Oxford.

1326
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.86% Phenylpropanoid pathway 21.87% Alkaloid pathway 20.59% Rosmarinic acid pathway 9.95% Steroid pathway 9.8% Flavonoid pathway 7.92%
Family Distribution
C4H 8.99% C3'H/CYP98A 7.76% IFS 6.0% CYP76 5.81% BAHD 4.77% DWF4/CYP90B1 4.61% 4CL 4.59% T3O 4.42%
Other Families 53.05%
More Families (95)
POD 179 4.15% NMT 116 2.69% BR6OX2/CYP85A2 95 2.2% STR 91 2.11% F3'H/CYP75B 81 1.88% G8O/G8H 79 1.83% IFR 74 1.71% IO 71 1.64% F3H 69 1.6% F3'5'H/CYP75A 69 1.6% CAS 69 1.6% SMT1/SMT2/SMT3 59 1.37% T16H 57 1.32% TPS 54 1.25% H6H 48 1.11% SGD 47 1.09% GS 43 1.0% GES 43 1.0% BR6OX1/CYP85A1 41 0.95% FNS 39 0.9% TRI/TRII 38 0.88% SLS 37 0.86% ROT3/CYP90C1 32 0.74% CODM/T6ODM 26 0.6% CHI 26 0.6% COMT 24 0.56% CAD 23 0.53% CPD/CYP90A1 23 0.53% CYP90D1 23 0.53% CYP71 23 0.53% DFR 22 0.51% F5H/CYP84A 22 0.51% 7DLH 21 0.49% 8HGO 21 0.49% LAC 21 0.49% LAMT 20 0.46% PYKS 20 0.46% CYP719 17 0.39% NCS 17 0.39% CCR 17 0.39% MVK 17 0.39% ANR 16 0.37% PMT 15 0.35% PAL 15 0.35% TAT 14 0.32% CPR 14 0.32% FPPS 14 0.32% CSE 13 0.3% RAS 12 0.28% MCT/IspD 12 0.28% 16OMT 11 0.25% CHS 11 0.25% SQS/FDFT1 11 0.25% CPI1 11 0.25% ISY 10 0.23% CYP51G1 10 0.23% DWF5 10 0.23% GGPPS 10 0.23% ANS/LDOX 9 0.21% HCT 9 0.21% PMK 9 0.21% DXR 9 0.21% COR 8 0.19% SMO1/SMO2 8 0.19% CCoAOMT 7 0.16% AACT 7 0.16% DXS 7 0.16% ADC 6 0.14% CNMT 6 0.14% DET2 6 0.14% HDS/IspG 6 0.14% HMGS 6 0.14% MVD 6 0.14% CMK/IspE 6 0.14% HPPR 5 0.12% XMT_MXMT_DXMT 4 0.09% MDS/IspF 4 0.09% MPO 3 0.07% 6OMT_4OMT_SOMT 3 0.07% CYP80B1 3 0.07% FLS 3 0.07% UFGT 3 0.07% FK 3 0.07% IDI 3 0.07% HMGR 3 0.07% TDC 2 0.05% ODC 2 0.05% SQE 2 0.05% DWF7 2 0.05% UGT 2 0.05% CYP80F1 1 0.02% TYDC_DDC 1 0.02% BBE 1 0.02% HYD1 1 0.02% HDR/IspH 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 396 19 BAHD (152) View species results
Phenylpropanoid pathway 290 12 POD (164) View species results
Alkaloid pathway 273 19 T3O (93) View species results
Rosmarinic acid pathway 132 7 C4H (84) View species results
Steroid pathway 130 13 CAS (65) View species results
Flavonoid pathway 105 9 IFR (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2328 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 227 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status Best Target
AagrOXFutg000006l0032970.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000006l0034900.1 Rosmarinic Acid TAT low borderline TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000017l0066670.1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000017l0066670.2 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000017l0066670.3 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000017l0066670.4 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000017l0066670.5 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
AagrOXFutg000018l0071240.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000042l0112520.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000050l0132140.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000063l0156730.1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
AagrOXFutg000091l0198550.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000113l0222130.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
AagrOXFutg000113l0222200.1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO