PlantSME Plant secondary metabolism enzyme database

Aquilaria sinensis (aquilaria_sinensis)

Imported from atlas release summary for Aquilaria sinensis.

1379
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.59% Alkaloid pathway 22.04% Phenylpropanoid pathway 21.32% Flavonoid pathway 11.97% Rosmarinic acid pathway 9.06% Steroid pathway 6.02%
Family Distribution
C4H 7.19% C3'H/CYP98A 6.29% BAHD 5.31% IFS 4.44% CYP76 4.15% 4CL 4.0% UGT 3.8% T3O 3.51%
Other Families 61.32%
More Families (96)
POD 120 3.48% 7DLGT 116 3.36% UFGT 111 3.22% DWF4/CYP90B1 89 2.58% NMT 70 2.03% CYP71 65 1.88% F3'H/CYP75B 64 1.86% F3H 63 1.83% BR6OX2/CYP85A2 58 1.68% CAS 54 1.57% STR 51 1.48% CAD 49 1.42% CSE 49 1.42% TPS 45 1.3% T16H 42 1.22% CODM/T6ODM 40 1.16% SGD 40 1.16% LAC 40 1.16% BBE 39 1.13% SMT1/SMT2/SMT3 38 1.1% H6H 37 1.07% G8O/G8H 36 1.04% GES 36 1.04% TRI/TRII 35 1.01% COMT 32 0.93% FNS 30 0.87% GS 29 0.84% PYKS 29 0.84% CYP51G1 29 0.84% IO 28 0.81% CYP90D1 28 0.81% COR 27 0.78% IFR 26 0.75% HCT 24 0.7% PMT 22 0.64% ANR 21 0.61% CPD/CYP90A1 21 0.61% CCR 19 0.55% TAT 19 0.55% 7DLH 18 0.52% F5H/CYP84A 17 0.49% RAS 17 0.49% 16OMT 16 0.46% SLS 16 0.46% NCS 15 0.43% ANS/LDOX 15 0.43% CHS 14 0.41% DFR 13 0.38% FPPS 13 0.38% CPR 11 0.32% PAL 9 0.26% LAMT 8 0.23% CNMT 8 0.23% 8HGO 8 0.23% F3'5'H/CYP75A 8 0.23% CCoAOMT 8 0.23% ROT3/CYP90C1 8 0.23% DXS 8 0.23% MPO 7 0.2% CYP719 7 0.2% SQS/FDFT1 7 0.2% HMGR 7 0.2% SQE 6 0.17% AACT 6 0.17% CHI 5 0.14% HPPR 5 0.14% DET2 5 0.14% GGPPS 5 0.14% CYP80B1 4 0.12% MVK 4 0.12% TYDC_DDC 3 0.09% FLS 3 0.09% BR6OX1/CYP85A1 3 0.09% SMO1/SMO2 3 0.09% HDR/IspH 3 0.09% MVD 3 0.09% PMK 3 0.09% MCT/IspD 3 0.09% IDI 3 0.09% ISY 2 0.06% CMK/IspE 2 0.06% ADC 1 0.03% 6OMT_4OMT_SOMT 1 0.03% XMT_MXMT_DXMT 1 0.03% TDC 1 0.03% ODC 1 0.03% DWF7 1 0.03% FK 1 0.03% DWF1 1 0.03% DWF5 1 0.03% HYD1 1 0.03% CPI1 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 408 19 BAHD (148) View species results
Alkaloid pathway 304 22 7DLGT (45) View species results
Phenylpropanoid pathway 294 11 POD (106) View species results
Flavonoid pathway 165 10 UFGT (98) View species results
Rosmarinic acid pathway 125 7 C4H (60) View species results
Steroid pathway 83 12 CAS (39) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1423 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 224 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
Asin02G0001510 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin02G0038900 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin03G0015030 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin03G0029300 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin04G0001000 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Asin04G0001440 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Asin04G0020070 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin05G0002020 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin05G0011450 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin05G0014030 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin06G0005880 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin07G0018680 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin07G0019090 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin08G0014980 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Asin08G0017210 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA