PlantSME Plant secondary metabolism enzyme database

Aralia elata (aralia_elata)

Imported from atlas release summary for Aralia elata.

1759
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.8% Alkaloid pathway 21.72% Phenylpropanoid pathway 15.69% Flavonoid pathway 13.53% Rosmarinic acid pathway 9.15% Steroid pathway 7.11%
Family Distribution
C4H 6.26% C3'H/CYP98A 5.69% BAHD 5.59% UGT 4.59% IFS 4.25% 7DLGT 4.06% UFGT 4.03% 4CL 3.62%
Other Families 61.91%
More Families (97)
CYP76 147 3.17% T3O 142 3.06% POD 135 2.91% F3H 108 2.33% CAD 95 2.05% DWF4/CYP90B1 95 2.05% NMT 93 2.01% BR6OX2/CYP85A2 90 1.94% TPS 88 1.9% BBE 85 1.83% CAS 85 1.83% GES 84 1.81% F3'H/CYP75B 82 1.77% CODM/T6ODM 80 1.73% CYP71 73 1.57% STR 68 1.47% SMT1/SMT2/SMT3 58 1.25% CYP90D1 55 1.19% LAC 50 1.08% 7DLH 46 0.99% TAT 46 0.99% T16H 44 0.95% TRI/TRII 42 0.91% CSE 42 0.91% HCT 40 0.86% IFR 39 0.84% NCS 38 0.82% H6H 34 0.73% GS 33 0.71% COMT 33 0.71% F5H/CYP84A 32 0.69% PYKS 30 0.65% PMT 28 0.6% RAS 28 0.6% SLS 27 0.58% G8O/G8H 26 0.56% 16OMT 23 0.5% IO 23 0.5% ANR 23 0.5% CYP51G1 23 0.5% CPD/CYP90A1 23 0.5% PAL 21 0.45% ANS/LDOX 20 0.43% FNS 19 0.41% CCR 19 0.41% F3'5'H/CYP75A 18 0.39% BR6OX1/CYP85A1 18 0.39% SQE 17 0.37% SGD 16 0.35% CPR 15 0.32% FPPS 15 0.32% 8HGO 14 0.3% COR 14 0.3% LAMT 12 0.26% DFR 12 0.26% MPO 11 0.24% AACT 10 0.22% GGPPS 10 0.22% CYP719 9 0.19% TYDC_DDC 9 0.19% DET2 9 0.19% CHS 8 0.17% SQS/FDFT1 8 0.17% CYP80B1 7 0.15% 6OMT_4OMT_SOMT 6 0.13% ISY 6 0.13% CHI 6 0.13% HPPR 6 0.13% DXS 6 0.13% CNMT 5 0.11% CYP80F1 5 0.11% TDC 5 0.11% XMT_MXMT_DXMT 5 0.11% CCoAOMT 5 0.11% HYD1 5 0.11% ROT3/CYP90C1 5 0.11% HMGR 5 0.11% HDS/IspG 5 0.11% MVK 5 0.11% ADC 4 0.09% FLS 4 0.09% SMO1/SMO2 4 0.09% MVD 4 0.09% HMGS 3 0.06% DXR 3 0.06% PMK 3 0.06% MCT/IspD 3 0.06% HDR/IspH 3 0.06% CPI1 2 0.04% CMK/IspE 2 0.04% MDS/IspF 2 0.04% ODC 1 0.02% DWF7 1 0.02% DWF5 1 0.02% DWF1 1 0.02% FK 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 20 UGT (200) View species results
Alkaloid pathway 382 17 7DLGT (83) View species results
Phenylpropanoid pathway 276 11 POD (109) View species results
Flavonoid pathway 238 9 UFGT (174) View species results
Rosmarinic acid pathway 161 7 C4H (74) View species results
Steroid pathway 125 13 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1741 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 327 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status Best Target
aralia_elata_AE02G00305.1 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
aralia_elata_AE03G00903.1 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE03G01440.1 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE04G02605.1 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
aralia_elata_AE04G03037.1 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
aralia_elata_AE07G00831.1 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE08G00431.1 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE08G01104.1 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE10G00118.1 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
aralia_elata_AE10G00119.1 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
aralia_elata_AE11G01485.1 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
aralia_elata_AE12G01824.1 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO