PlantSME Plant secondary metabolism enzyme database

Arctium lappa (arctium_lappa)

Imported from atlas release summary for Arctium lappa.

2088
Candidate Protein Records
1734
Pathway-Level Records
4405
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 547 20 BAHD (204) View species results
Alkaloid pathway 367 19 7DLGT (80) View species results
Phenylpropanoid pathway 338 11 POD (140) View species results
Flavonoid pathway 209 10 UFGT (137) View species results
Rosmarinic acid pathway 165 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 314 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status
arctium_lappa_Alap.ptg000012l.g756.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000012l.g757.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000013l.g2205.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000013l.g2567.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000013l.g2569.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000013l.g3879.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000014l.g1349.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000014l.g451.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000014l.g454.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000014l.g522.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000014l.g527.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000015l.g1431.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000015l.g1469.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000015l.g1531.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000015l.g1647.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000016l.g1703.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000017l.g2120.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000018l.g337.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000018l.g583.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000019l.g2297.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000020l.g1075.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000021l.g2151.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000022l.g491.t1 Rosmarinic Acid 4CL low borderline
arctium_lappa_Alap.ptg000033l.g2680.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000033l.g2892.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000033l.g3069.t1 Rosmarinic Acid 4CL medium pass
arctium_lappa_Alap.ptg000033l.g3444.t1 Rosmarinic Acid 4CL low borderline