Arctium lappa (arctium_lappa)
Imported from atlas release summary for Arctium lappa.
1734
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1734
Candidate Genes
C4H
6.47%
C3'H/CYP98A
6.22%
BAHD
5.79%
CYP76
4.2%
4CL
4.02%
UGT
3.95%
IFS
3.81%
7DLGT
3.7%
Other Families
61.84%
More Families (98)
POD
153
3.47%
UFGT
147
3.34%
T3O
142
3.22%
F3H
134
3.04%
DWF4/CYP90B1
121
2.75%
F3'H/CYP75B
97
2.2%
NMT
81
1.84%
H6H
78
1.77%
BR6OX2/CYP85A2
76
1.73%
STR
75
1.7%
SMT1/SMT2/SMT3
67
1.52%
CODM/T6ODM
60
1.36%
TPS
60
1.36%
CAD
56
1.27%
TRI/TRII
55
1.25%
CYP71
55
1.25%
T16H
53
1.2%
GES
52
1.18%
LAC
51
1.16%
CAS
48
1.09%
TAT
41
0.93%
CSE
38
0.86%
IFR
36
0.82%
G8O/G8H
34
0.77%
PYKS
33
0.75%
GS
33
0.75%
HCT
33
0.75%
CYP90D1
33
0.75%
SLS
31
0.7%
COMT
31
0.7%
NCS
29
0.66%
F3'5'H/CYP75A
28
0.64%
FNS
27
0.61%
F5H/CYP84A
26
0.59%
RAS
26
0.59%
16OMT
25
0.57%
7DLH
24
0.54%
CPD/CYP90A1
24
0.54%
PMT
23
0.52%
SGD
23
0.52%
BBE
23
0.52%
IO
22
0.5%
PAL
21
0.48%
CYP51G1
20
0.45%
BR6OX1/CYP85A1
17
0.39%
8HGO
16
0.36%
CPR
16
0.36%
LAMT
15
0.34%
ISY
15
0.34%
ANR
15
0.34%
CYP80B1
14
0.32%
TYDC_DDC
13
0.3%
CCR
13
0.3%
COR
12
0.27%
SQE
12
0.27%
HMGR
12
0.27%
CCoAOMT
11
0.25%
DET2
11
0.25%
FPPS
11
0.25%
CYP719
10
0.23%
HPPR
10
0.23%
ROT3/CYP90C1
10
0.23%
ANS/LDOX
9
0.2%
MPO
8
0.18%
CHI
8
0.18%
ADC
7
0.16%
CNMT
7
0.16%
SQS/FDFT1
7
0.16%
DXS
7
0.16%
DFR
6
0.14%
MVD
6
0.14%
GGPPS
6
0.14%
AACT
6
0.14%
CHS
5
0.11%
SMO1/SMO2
5
0.11%
IDI
5
0.11%
TDC
4
0.09%
DWF1
4
0.09%
DXR
4
0.09%
HDS/IspG
4
0.09%
MVK
4
0.09%
HMGS
4
0.09%
6OMT_4OMT_SOMT
3
0.07%
XMT_MXMT_DXMT
3
0.07%
CYP80F1
3
0.07%
FLS
3
0.07%
DWF7
3
0.07%
PMK
3
0.07%
MCT/IspD
2
0.05%
GPPS
2
0.05%
ODC
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
MDS/IspF
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 547 | 20 | BAHD (204) | View species results |
| Alkaloid pathway | 367 | 19 | 7DLGT (80) | View species results |
| Phenylpropanoid pathway | 338 | 11 | POD (140) | View species results |
| Flavonoid pathway | 209 | 10 | UFGT (137) | View species results |
| Rosmarinic acid pathway | 165 | 7 | C4H (63) | View species results |
| Steroid pathway | 108 | 13 | SMT1/SMT2/SMT3 (45) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1752 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| arctium_lappa_Alap.ptg000001l.g1017.t1 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| arctium_lappa_Alap.ptg000002l.g4306.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000004l.g1360.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g2875.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g3589.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g3591.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g3593.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g3594.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g4404.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000005l.g4406.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000007l.g3527.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000007l.g563.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000008l.g1323.t1 | Steroid | CAS | low | borderline | CAS__00002__sp_E2IUB0_CASS_KALDA |
| arctium_lappa_Alap.ptg000009l.g2152.t1 | Steroid | CAS | medium | pass | CAS__00006__sp_Q2XPU6_CAS1_RICCO |
| arctium_lappa_Alap.ptg000009l.g2779.t1 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| arctium_lappa_Alap.ptg000009l.g3087.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000009l.g3089.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000011l.g3445.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000011l.g3446.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000011l.g3447.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000011l.g3451.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000011l.g4208.t1 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| arctium_lappa_Alap.ptg000012l.g1356.t1 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| arctium_lappa_Alap.ptg000013l.g2350.t1 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| arctium_lappa_Alap.ptg000015l.g1462.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000015l.g1464.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000015l.g1466.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000016l.g1535.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000016l.g1538.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000016l.g1539.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000016l.g1540.t1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000019l.g2823.t1 | Steroid | CAS | medium | pass | CAS__00008__sp_Q6BE25_CAS1_CUCPE |
| arctium_lappa_Alap.ptg000020l.g1118.t1 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| arctium_lappa_Alap.ptg000020l.g1562.t1 | Steroid | CAS | low | borderline | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| arctium_lappa_Alap.ptg000020l.g797.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000022l.g1006.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000022l.g1443.t1 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| arctium_lappa_Alap.ptg000022l.g561.t1 | Steroid | CAS | medium | pass | CAS__00005__sp_P38605_CAS1_ARATH |
| arctium_lappa_Alap.ptg000022l.g569.t1 | Steroid | CAS | medium | pass | CAS__00004__sp_O82139_CAS1_PANGI |
| arctium_lappa_Alap.ptg000022l.g570.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000022l.g571.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000022l.g829.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000023l.g1603.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000025l.g1796.t1 | Steroid | CAS | medium | pass | CAS__00014__sp_Q9SXV6_CAS1_GLYGL |
| arctium_lappa_Alap.ptg000025l.g2296.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000025l.g2298.t1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| arctium_lappa_Alap.ptg000033l.g3519.t1 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| arctium_lappa_Alap.ptg000033l.g3649.t1 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |