PlantSME Plant secondary metabolism enzyme database

Arctium lappa (arctium_lappa)

Imported from atlas release summary for Arctium lappa.

1734
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 547 20 BAHD (204) View species results
Alkaloid pathway 367 19 7DLGT (80) View species results
Phenylpropanoid pathway 338 11 POD (140) View species results
Flavonoid pathway 209 10 UFGT (137) View species results
Rosmarinic acid pathway 165 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1752 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 314 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
arctium_lappa_Alap.ptg000007l.g3247.t1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
arctium_lappa_Alap.ptg000007l.g3248.t1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
arctium_lappa_Alap.ptg000007l.g3249.t1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
arctium_lappa_Alap.ptg000007l.g3507.t1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
arctium_lappa_Alap.ptg000007l.g3544.t1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
arctium_lappa_Alap.ptg000007l.g4085.t1 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
arctium_lappa_Alap.ptg000007l.g4086.t1 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
arctium_lappa_Alap.ptg000007l.g4157.t1 Terpenoid BAHD medium pass BAHD__00014__sp_B9RK42_GPC1_RICCO
arctium_lappa_Alap.ptg000007l.g4335.t1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
arctium_lappa_Alap.ptg000007l.g436.t1 Terpenoid BAHD low borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
arctium_lappa_Alap.ptg000007l.g4436.t1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
arctium_lappa_Alap.ptg000008l.g1182.t1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000008l.g250.t1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
arctium_lappa_Alap.ptg000008l.g255.t1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
arctium_lappa_Alap.ptg000008l.g391.t1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
arctium_lappa_Alap.ptg000008l.g699.t1 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
arctium_lappa_Alap.ptg000009l.g1773.t1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
arctium_lappa_Alap.ptg000009l.g2325.t1 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
arctium_lappa_Alap.ptg000009l.g2698.t1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
arctium_lappa_Alap.ptg000009l.g2763.t1 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
arctium_lappa_Alap.ptg000009l.g2946.t1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
arctium_lappa_Alap.ptg000009l.g2947.t1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
arctium_lappa_Alap.ptg000009l.g2955.t1 Terpenoid BAHD low borderline BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
arctium_lappa_Alap.ptg000009l.g3497.t1 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
arctium_lappa_Alap.ptg000009l.g3508.t1 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
arctium_lappa_Alap.ptg000009l.g3597.t1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
arctium_lappa_Alap.ptg000009l.g3598.t1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000009l.g3600.t1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000009l.g3602.t1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000009l.g3603.t1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000009l.g4527.t1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
arctium_lappa_Alap.ptg000010l.g116.t1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
arctium_lappa_Alap.ptg000010l.g1272.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
arctium_lappa_Alap.ptg000010l.g1273.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
arctium_lappa_Alap.ptg000010l.g1274.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
arctium_lappa_Alap.ptg000010l.g1275.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
arctium_lappa_Alap.ptg000010l.g1276.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
arctium_lappa_Alap.ptg000010l.g136.t1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
arctium_lappa_Alap.ptg000010l.g137.t1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
arctium_lappa_Alap.ptg000010l.g139.t1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
arctium_lappa_Alap.ptg000010l.g140.t1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
arctium_lappa_Alap.ptg000010l.g20.t1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
arctium_lappa_Alap.ptg000010l.g227.t1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
arctium_lappa_Alap.ptg000010l.g816.t1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
arctium_lappa_Alap.ptg000011l.g2512.t1 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
arctium_lappa_Alap.ptg000011l.g2718.t1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
arctium_lappa_Alap.ptg000011l.g2911.t1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
arctium_lappa_Alap.ptg000011l.g2912.t1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
arctium_lappa_Alap.ptg000011l.g2918.t1 Terpenoid BAHD medium pass BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
arctium_lappa_Alap.ptg000011l.g2920.t1 Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF