PlantSME Plant secondary metabolism enzyme database

Artocarpus altilis (artocarpus_altilis)

Imported from atlas release summary for Artocarpus altilis.

1630
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.86% Alkaloid pathway 22.94% Phenylpropanoid pathway 18.9% Flavonoid pathway 14.6% Steroid pathway 6.63% Rosmarinic acid pathway 6.07%
Family Distribution
C4H 6.24% BAHD 5.71% UGT 4.62% C3'H/CYP98A 4.37% 7DLGT 3.98% UFGT 3.83% 4CL 3.58% CYP76 3.55%
Other Families 64.12%
More Families (96)
POD 137 3.4% F3H 129 3.2% IFS 123 3.06% NMT 85 2.11% T3O 84 2.09% CODM/T6ODM 81 2.01% CAD 75 1.86% STR 70 1.74% H6H 68 1.69% F3'H/CYP75B 68 1.69% CAS 65 1.61% DWF4/CYP90B1 62 1.54% BR6OX2/CYP85A2 58 1.44% G8O/G8H 53 1.32% SMT1/SMT2/SMT3 52 1.29% TRI/TRII 51 1.27% PYKS 50 1.24% COMT 49 1.22% LAC 44 1.09% CSE 43 1.07% CYP71 43 1.07% TPS 43 1.07% T16H 42 1.04% IFR 42 1.04% GES 40 0.99% F5H/CYP84A 40 0.99% HCT 37 0.92% BBE 36 0.89% IO 32 0.8% FNS 32 0.8% 16OMT 31 0.77% RAS 31 0.77% GS 30 0.75% CYP90D1 30 0.75% NCS 28 0.7% SGD 26 0.65% PMT 26 0.65% CHS 26 0.65% ANS/LDOX 25 0.62% 7DLH 24 0.6% F3'5'H/CYP75A 24 0.6% SLS 23 0.57% TAT 23 0.57% ANR 21 0.52% CCR 21 0.52% CPD/CYP90A1 21 0.52% DFR 20 0.5% PAL 17 0.42% LAMT 16 0.4% COR 16 0.4% CPR 15 0.37% MPO 14 0.35% ROT3/CYP90C1 14 0.35% CYP80B1 12 0.3% CCoAOMT 12 0.3% BR6OX1/CYP85A1 12 0.3% GGPPS 12 0.3% CNMT 11 0.27% CHI 11 0.27% FPPS 11 0.27% ISY 9 0.22% CYP719 8 0.2% 8HGO 8 0.2% SQS/FDFT1 8 0.2% CYP51G1 8 0.2% AACT 8 0.2% DXS 7 0.17% SQE 6 0.15% MVD 6 0.15% TDC 5 0.12% SMO1/SMO2 5 0.12% MCT/IspD 5 0.12% HMGR 5 0.12% ADC 4 0.1% HPPR 4 0.1% DXR 4 0.1% MVK 4 0.1% MDS/IspF 4 0.1% CYP80F1 3 0.07% 6OMT_4OMT_SOMT 3 0.07% DET2 3 0.07% CMK/IspE 3 0.07% PMK 3 0.07% TYDC_DDC 2 0.05% FLS 2 0.05% FK 2 0.05% HYD1 2 0.05% CPI1 2 0.05% HDR/IspH 2 0.05% IDI 2 0.05% HMGS 2 0.05% ODC 1 0.02% DWF7 1 0.02% DWF5 1 0.02% DWF1 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 503 19 BAHD (185) View species results
Alkaloid pathway 374 25 7DLGT (53) View species results
Phenylpropanoid pathway 308 12 POD (116) View species results
Flavonoid pathway 238 12 UFGT (138) View species results
Steroid pathway 108 12 CAS (54) View species results
Rosmarinic acid pathway 99 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1354 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 298 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
Aaltiscaffold12520044910.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Aaltiscaffold12520044920.1 Terpenoid FPPS low borderline FPPS__00008__sp_Q4JHN6_FPS_PANGI
Aaltiscaffold16210070310.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Aaltiscaffold1720630088200.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Aaltiscaffold245890170130.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Aaltiscaffold32040209060.1 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Aaltiscaffold3430217290.1 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Aaltiscaffold34580219220.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Aaltiscaffold39050233040.1 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Aaltiscaffold61890270990.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Aaltiscaffold9860339410.1 Terpenoid FPPS low borderline FPPS__00001__sp_B8XA40_ZFPS_SOLHA