Artocarpus altilis (artocarpus_altilis)
Imported from atlas release summary for Artocarpus altilis.
1630
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1630
Candidate Genes
C4H
6.24%
BAHD
5.71%
UGT
4.62%
C3'H/CYP98A
4.37%
7DLGT
3.98%
UFGT
3.83%
4CL
3.58%
CYP76
3.55%
Other Families
64.12%
More Families (96)
POD
137
3.4%
F3H
129
3.2%
IFS
123
3.06%
NMT
85
2.11%
T3O
84
2.09%
CODM/T6ODM
81
2.01%
CAD
75
1.86%
STR
70
1.74%
H6H
68
1.69%
F3'H/CYP75B
68
1.69%
CAS
65
1.61%
DWF4/CYP90B1
62
1.54%
BR6OX2/CYP85A2
58
1.44%
G8O/G8H
53
1.32%
SMT1/SMT2/SMT3
52
1.29%
TRI/TRII
51
1.27%
PYKS
50
1.24%
COMT
49
1.22%
LAC
44
1.09%
CSE
43
1.07%
CYP71
43
1.07%
TPS
43
1.07%
T16H
42
1.04%
IFR
42
1.04%
GES
40
0.99%
F5H/CYP84A
40
0.99%
HCT
37
0.92%
BBE
36
0.89%
IO
32
0.8%
FNS
32
0.8%
16OMT
31
0.77%
RAS
31
0.77%
GS
30
0.75%
CYP90D1
30
0.75%
NCS
28
0.7%
SGD
26
0.65%
PMT
26
0.65%
CHS
26
0.65%
ANS/LDOX
25
0.62%
7DLH
24
0.6%
F3'5'H/CYP75A
24
0.6%
SLS
23
0.57%
TAT
23
0.57%
ANR
21
0.52%
CCR
21
0.52%
CPD/CYP90A1
21
0.52%
DFR
20
0.5%
PAL
17
0.42%
LAMT
16
0.4%
COR
16
0.4%
CPR
15
0.37%
MPO
14
0.35%
ROT3/CYP90C1
14
0.35%
CYP80B1
12
0.3%
CCoAOMT
12
0.3%
BR6OX1/CYP85A1
12
0.3%
GGPPS
12
0.3%
CNMT
11
0.27%
CHI
11
0.27%
FPPS
11
0.27%
ISY
9
0.22%
CYP719
8
0.2%
8HGO
8
0.2%
SQS/FDFT1
8
0.2%
CYP51G1
8
0.2%
AACT
8
0.2%
DXS
7
0.17%
SQE
6
0.15%
MVD
6
0.15%
TDC
5
0.12%
SMO1/SMO2
5
0.12%
MCT/IspD
5
0.12%
HMGR
5
0.12%
ADC
4
0.1%
HPPR
4
0.1%
DXR
4
0.1%
MVK
4
0.1%
MDS/IspF
4
0.1%
CYP80F1
3
0.07%
6OMT_4OMT_SOMT
3
0.07%
DET2
3
0.07%
CMK/IspE
3
0.07%
PMK
3
0.07%
TYDC_DDC
2
0.05%
FLS
2
0.05%
FK
2
0.05%
HYD1
2
0.05%
CPI1
2
0.05%
HDR/IspH
2
0.05%
IDI
2
0.05%
HMGS
2
0.05%
ODC
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
DWF1
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 503 | 19 | BAHD (185) | View species results |
| Alkaloid pathway | 374 | 25 | 7DLGT (53) | View species results |
| Phenylpropanoid pathway | 308 | 12 | POD (116) | View species results |
| Flavonoid pathway | 238 | 12 | UFGT (138) | View species results |
| Steroid pathway | 108 | 12 | CAS (54) | View species results |
| Rosmarinic acid pathway | 99 | 7 | C4H (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1354 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 298 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aaltiscaffold39050233020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold4470244580.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aaltiscaffold4550245780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold5720265910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold5980269100.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold7110285050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold740290180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold740290190.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold740290200.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold7870297010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold8070304830.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Aaltiscaffold8150306830.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold87560313240.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold8880316800.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold900323550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold920326230.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold920326240.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold920326260.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold9460329850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aaltiscaffold9720333000.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |