PlantSME Plant secondary metabolism enzyme database

Artocarpus nanchuanensis (artocarpus_nanchuanensis)

Imported from atlas release summary for Artocarpus nanchuanensis.

2152
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.25% Alkaloid pathway 21.42% Phenylpropanoid pathway 19.47% Flavonoid pathway 13.66% Rosmarinic acid pathway 8.83% Steroid pathway 6.37%
Family Distribution
C4H 5.84% C3'H/CYP98A 5.71% BAHD 5.71% UGT 4.04% IFS 3.85% 7DLGT 3.64% UFGT 3.53% CYP76 3.53%
Other Families 64.14%
More Families (97)
POD 175 3.29% 4CL 171 3.21% T3O 169 3.17% F3H 163 3.06% DWF4/CYP90B1 125 2.35% CAD 122 2.29% NMT 97 1.82% F3'H/CYP75B 96 1.8% STR 94 1.77% CODM/T6ODM 89 1.67% BR6OX2/CYP85A2 89 1.67% H6H 88 1.65% CAS 80 1.5% CYP71 76 1.43% HCT 71 1.33% TPS 68 1.28% GES 63 1.18% COMT 63 1.18% SMT1/SMT2/SMT3 61 1.15% IFR 60 1.13% TRI/TRII 59 1.11% PYKS 55 1.03% RAS 53 1.0% GS 50 0.94% G8O/G8H 49 0.92% T16H 48 0.9% 16OMT 47 0.88% CSE 47 0.88% BBE 45 0.85% LAC 45 0.85% ANR 44 0.83% CYP90D1 40 0.75% PMT 38 0.71% NCS 37 0.7% 7DLH 34 0.64% SGD 32 0.6% FNS 32 0.6% IO 30 0.56% F5H/CYP84A 30 0.56% COR 29 0.54% TAT 29 0.54% CHS 27 0.51% CCR 26 0.49% LAMT 25 0.47% F3'5'H/CYP75A 24 0.45% CNMT 21 0.39% PAL 21 0.39% CPD/CYP90A1 21 0.39% CYP51G1 19 0.36% SLS 18 0.34% 8HGO 18 0.34% ANS/LDOX 18 0.34% ROT3/CYP90C1 18 0.34% MPO 15 0.28% CHI 15 0.28% FPPS 15 0.28% CYP719 14 0.26% DFR 14 0.26% GGPPS 14 0.26% ISY 12 0.23% CPR 11 0.21% SQS/FDFT1 11 0.21% BR6OX1/CYP85A1 10 0.19% DXS 10 0.19% AACT 9 0.17% CCoAOMT 7 0.13% SQE 7 0.13% DET2 7 0.13% MVK 7 0.13% MVD 7 0.13% HPPR 6 0.11% MCT/IspD 6 0.11% HMGR 5 0.09% 6OMT_4OMT_SOMT 4 0.08% CYP80F1 4 0.08% XMT_MXMT_DXMT 4 0.08% SMO1/SMO2 4 0.08% PMK 4 0.08% CYP80B1 3 0.06% HYD1 3 0.06% MDS/IspF 3 0.06% IDI 3 0.06% CMK/IspE 3 0.06% HMGS 3 0.06% HDR/IspH 3 0.06% ADC 2 0.04% TDC 2 0.04% TYDC_DDC 2 0.04% FLS 2 0.04% CPI1 2 0.04% DWF7 2 0.04% DWF5 2 0.04% FK 2 0.04% HDS/IspG 2 0.04% DXR 2 0.04% ODC 1 0.02% DWF1 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 651 19 BAHD (257) View species results
Alkaloid pathway 461 24 7DLGT (78) View species results
Phenylpropanoid pathway 419 11 POD (164) View species results
Flavonoid pathway 294 12 UFGT (173) View species results
Rosmarinic acid pathway 190 7 C4H (89) View species results
Steroid pathway 137 14 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1925 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 428 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 6OMT_4OMT_SOMT
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Gene Pathway Family Confidence Status Best Target
artocarpus_nanchuanensis_EVM0003770.1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
artocarpus_nanchuanensis_EVM0018705.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
artocarpus_nanchuanensis_EVM0019899.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
artocarpus_nanchuanensis_EVM0032533.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO