PlantSME Plant secondary metabolism enzyme database

Asparagus kiusianus (asparagus_kiusianus)

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Imported from atlas release summary for Asparagus kiusianus.

1465
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.81% Alkaloid pathway 21.5% Phenylpropanoid pathway 21.09% Flavonoid pathway 12.97% Rosmarinic acid pathway 9.15% Steroid pathway 6.48%
Family Distribution
C4H 5.98% BAHD 5.63% C3'H/CYP98A 5.46% 4CL 4.23% POD 4.18% UGT 4.12% UFGT 3.5% 7DLGT 3.41%
Other Families 63.48%
More Families (97)
IFS 122 3.33% T3O 118 3.22% CYP76 108 2.95% F3H 86 2.35% DWF4/CYP90B1 79 2.16% NMT 72 1.97% STR 72 1.97% BR6OX2/CYP85A2 66 1.8% F3'H/CYP75B 65 1.78% CYP71 60 1.64% H6H 58 1.58% CAD 55 1.5% TRI/TRII 53 1.45% CSE 47 1.28% CAS 43 1.17% SMT1/SMT2/SMT3 43 1.17% SGD 42 1.15% LAC 42 1.15% HMGR 40 1.09% CODM/T6ODM 39 1.07% IFR 38 1.04% TPS 37 1.01% PMT 36 0.98% RAS 34 0.93% G8O/G8H 32 0.87% HCT 32 0.87% PYKS 30 0.82% GES 29 0.79% T16H 28 0.76% FNS 27 0.74% GS 25 0.68% CPD/CYP90A1 25 0.68% CYP90D1 24 0.66% SLS 23 0.63% COMT 23 0.63% CPR 22 0.6% IO 20 0.55% 16OMT 20 0.55% 7DLH 20 0.55% BR6OX1/CYP85A1 20 0.55% NCS 19 0.52% CCR 19 0.52% COR 18 0.49% CYP80B1 18 0.49% DFR 18 0.49% PAL 18 0.49% CYP51G1 18 0.49% ANR 17 0.46% F3'5'H/CYP75A 17 0.46% F5H/CYP84A 16 0.44% FPPS 15 0.41% 8HGO 13 0.36% ROT3/CYP90C1 13 0.36% BBE 12 0.33% CCoAOMT 11 0.3% TAT 10 0.27% MVK 10 0.27% MVD 10 0.27% CHS 9 0.25% SQS/FDFT1 9 0.25% GGPPS 9 0.25% CNMT 8 0.22% ISY 8 0.22% ANS/LDOX 8 0.22% DET2 8 0.22% AACT 8 0.22% CMK/IspE 8 0.22% 6OMT_4OMT_SOMT 7 0.19% SMO1/SMO2 7 0.19% CPI1 7 0.19% LAMT 6 0.16% MPO 6 0.16% CYP719 6 0.16% TYDC_DDC 6 0.16% CHI 6 0.16% DWF1 6 0.16% SQE 6 0.16% TDC 5 0.14% ADC 5 0.14% PMK 5 0.14% MCT/IspD 5 0.14% ODC 4 0.11% HPPR 4 0.11% DXS 4 0.11% HYD1 3 0.08% GPPS 3 0.08% IDI 3 0.08% HMGS 3 0.08% XMT_MXMT_DXMT 2 0.05% FK 2 0.05% DWF7 2 0.05% HDS/IspG 2 0.05% DXR 2 0.05% MDS/IspF 2 0.05% CYP80F1 1 0.03% DWF5 1 0.03% HDR/IspH 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 422 19 BAHD (155) View species results
Alkaloid pathway 315 23 7DLGT (56) View species results
Phenylpropanoid pathway 309 13 POD (121) View species results
Flavonoid pathway 190 12 UFGT (112) View species results
Rosmarinic acid pathway 134 7 C4H (59) View species results
Steroid pathway 95 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1318 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 272 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: XMT_MXMT_DXMT
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Gene Pathway Family Confidence Status Best Target
asparagus_kiusianus_K1p1ch04g23430 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR
asparagus_kiusianus_K1p1ch04g23431 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA