PlantSME Plant secondary metabolism enzyme database

Atlantia buxifolia (atlantia_buxifolia)

Imported from atlas release summary for Atlantia buxifolia.

3711
Candidate Protein Records
3030
Pathway-Level Records
6721
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.8% Alkaloid pathway 24.79% Phenylpropanoid pathway 18.81% Flavonoid pathway 9.04% Rosmarinic acid pathway 8.84% Steroid pathway 8.71%
Family Distribution
BAHD 7.22% 4CL 5.22% C4H 4.69% C3'H/CYP98A 4.69% NMT 3.88% POD 3.65% IFS 3.12% CYP76 2.8%
Other Families 64.74%
More Families (97)
F3H 179 2.66% T3O 177 2.63% UGT 174 2.59% DWF4/CYP90B1 159 2.37% 7DLGT 153 2.28% UFGT 142 2.11% CAS 137 2.04% STR 135 2.01% CAD 125 1.86% SMT1/SMT2/SMT3 122 1.82% CODM/T6ODM 119 1.77% IFR 118 1.76% TPS 111 1.65% TRI/TRII 108 1.61% CYP71 108 1.61% GS 104 1.55% GES 100 1.49% F3'H/CYP75B 94 1.4% SGD 88 1.31% H6H 85 1.26% BR6OX2/CYP85A2 81 1.21% COMT 79 1.18% RAS 69 1.03% HCT 60 0.89% TAT 60 0.89% CYP90D1 55 0.82% G8O/G8H 50 0.74% F3'5'H/CYP75A 49 0.73% 7DLH 48 0.71% CCR 47 0.7% PMT 46 0.68% 8HGO 46 0.68% LAC 46 0.68% GGPPS 45 0.67% T16H 43 0.64% COR 43 0.64% AACT 41 0.61% CSE 39 0.58% 16OMT 38 0.57% ANR 38 0.57% LAMT 37 0.55% IO 33 0.49% CPD/CYP90A1 33 0.49% CNMT 32 0.48% SLS 31 0.46% PYKS 29 0.43% FNS 28 0.42% CCoAOMT 28 0.42% DFR 27 0.4% SQS/FDFT1 27 0.4% NCS 23 0.34% MPO 23 0.34% ANS/LDOX 20 0.3% DXS 20 0.3% HPPR 19 0.28% ROT3/CYP90C1 19 0.28% SQE 19 0.28% BR6OX1/CYP85A1 19 0.28% FPPS 19 0.28% BBE 16 0.24% CPR 16 0.24% MCT/IspD 16 0.24% TYDC_DDC 15 0.22% F5H/CYP84A 15 0.22% MVK 14 0.21% CHS 13 0.19% CHI 13 0.19% HDS/IspG 13 0.19% ISY 12 0.18% PAL 12 0.18% CYP51G1 12 0.18% CYP719 11 0.16% CYP80B1 10 0.15% FK 10 0.15% DXR 10 0.15% HYD1 9 0.13% HMGR 9 0.13% XMT_MXMT_DXMT 8 0.12% MVD 8 0.12% FLS 7 0.1% TDC 6 0.09% 6OMT_4OMT_SOMT 6 0.09% HDR/IspH 6 0.09% ADC 5 0.07% ODC 4 0.06% DET2 4 0.06% SMO1/SMO2 4 0.06% DWF7 3 0.04% CPI1 3 0.04% MDS/IspF 3 0.04% DWF1 2 0.03% HMGS 2 0.03% PMK 2 0.03% CMK/IspE 2 0.03% DWF5 1 0.01% IDI 1 0.01% GPPS 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 903 19 BAHD (430) View species results
Alkaloid pathway 751 28 NMT (137) View species results
Phenylpropanoid pathway 570 11 POD (225) View species results
Flavonoid pathway 274 13 UFGT (130) View species results
Rosmarinic acid pathway 268 7 C4H (72) View species results
Steroid pathway 264 13 CAS (124) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2075 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 614 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
Abuxscaffold93170270950.1 Flavonoid IFS medium borderline
Abuxscaffold93170271350.1 Flavonoid IFS low borderline
Abuxscaffold93170271410.1 Flavonoid IFS medium borderline
Abuxscaffold93170271430.1 Flavonoid IFS medium borderline
Abuxscaffold93690277560.1 Flavonoid IFS medium borderline
Abuxscaffold95270278710.1 Flavonoid IFS low borderline
Abuxscaffold96750280910.1 Flavonoid IFS low borderline
Abuxscaffold96750280910.2 Flavonoid IFS low borderline
Abuxscaffold96750280910.3 Flavonoid IFS low borderline
Abuxscaffold96750280910.4 Flavonoid IFS low borderline