Atlantia buxifolia (atlantia_buxifolia)
Imported from atlas release summary for Atlantia buxifolia.
3030
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3030
Candidate Genes
BAHD
7.22%
4CL
5.22%
C4H
4.69%
C3'H/CYP98A
4.69%
NMT
3.88%
POD
3.65%
IFS
3.12%
CYP76
2.8%
Other Families
64.74%
More Families (97)
F3H
179
2.66%
T3O
177
2.63%
UGT
174
2.59%
DWF4/CYP90B1
159
2.37%
7DLGT
153
2.28%
UFGT
142
2.11%
CAS
137
2.04%
STR
135
2.01%
CAD
125
1.86%
SMT1/SMT2/SMT3
122
1.82%
CODM/T6ODM
119
1.77%
IFR
118
1.76%
TPS
111
1.65%
TRI/TRII
108
1.61%
CYP71
108
1.61%
GS
104
1.55%
GES
100
1.49%
F3'H/CYP75B
94
1.4%
SGD
88
1.31%
H6H
85
1.26%
BR6OX2/CYP85A2
81
1.21%
COMT
79
1.18%
RAS
69
1.03%
HCT
60
0.89%
TAT
60
0.89%
CYP90D1
55
0.82%
G8O/G8H
50
0.74%
F3'5'H/CYP75A
49
0.73%
7DLH
48
0.71%
CCR
47
0.7%
PMT
46
0.68%
8HGO
46
0.68%
LAC
46
0.68%
GGPPS
45
0.67%
T16H
43
0.64%
COR
43
0.64%
AACT
41
0.61%
CSE
39
0.58%
16OMT
38
0.57%
ANR
38
0.57%
LAMT
37
0.55%
IO
33
0.49%
CPD/CYP90A1
33
0.49%
CNMT
32
0.48%
SLS
31
0.46%
PYKS
29
0.43%
FNS
28
0.42%
CCoAOMT
28
0.42%
DFR
27
0.4%
SQS/FDFT1
27
0.4%
NCS
23
0.34%
MPO
23
0.34%
ANS/LDOX
20
0.3%
DXS
20
0.3%
HPPR
19
0.28%
ROT3/CYP90C1
19
0.28%
SQE
19
0.28%
BR6OX1/CYP85A1
19
0.28%
FPPS
19
0.28%
BBE
16
0.24%
CPR
16
0.24%
MCT/IspD
16
0.24%
TYDC_DDC
15
0.22%
F5H/CYP84A
15
0.22%
MVK
14
0.21%
CHS
13
0.19%
CHI
13
0.19%
HDS/IspG
13
0.19%
ISY
12
0.18%
PAL
12
0.18%
CYP51G1
12
0.18%
CYP719
11
0.16%
CYP80B1
10
0.15%
FK
10
0.15%
DXR
10
0.15%
HYD1
9
0.13%
HMGR
9
0.13%
XMT_MXMT_DXMT
8
0.12%
MVD
8
0.12%
FLS
7
0.1%
TDC
6
0.09%
6OMT_4OMT_SOMT
6
0.09%
HDR/IspH
6
0.09%
ADC
5
0.07%
ODC
4
0.06%
DET2
4
0.06%
SMO1/SMO2
4
0.06%
DWF7
3
0.04%
CPI1
3
0.04%
MDS/IspF
3
0.04%
DWF1
2
0.03%
HMGS
2
0.03%
PMK
2
0.03%
CMK/IspE
2
0.03%
DWF5
1
0.01%
IDI
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 903 | 19 | BAHD (430) | View species results |
| Alkaloid pathway | 751 | 28 | NMT (137) | View species results |
| Phenylpropanoid pathway | 570 | 11 | POD (225) | View species results |
| Flavonoid pathway | 274 | 13 | UFGT (130) | View species results |
| Rosmarinic acid pathway | 268 | 7 | C4H (72) | View species results |
| Steroid pathway | 264 | 13 | CAS (124) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2075 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 614 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Abuxscaffold293210180630.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold5297_20215960.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217900.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217910.1 | Flavonoid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| Abuxscaffold293210180630.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold5297_20215960.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217900.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217910.1 | Phenylpropanoid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| Abuxscaffold293210180630.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold5297_20215960.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217900.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Abuxscaffold54070217910.1 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |