Atlantia buxifolia (atlantia_buxifolia)
Imported from atlas release summary for Atlantia buxifolia.
3711
Candidate Protein Records
3030
Pathway-Level Records
6721
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6721
Family-Level Calls
BAHD
7.22%
4CL
5.22%
C4H
4.69%
C3'H/CYP98A
4.69%
NMT
3.88%
POD
3.65%
IFS
3.12%
CYP76
2.8%
Other Families
64.74%
More Families (97)
F3H
179
2.66%
T3O
177
2.63%
UGT
174
2.59%
DWF4/CYP90B1
159
2.37%
7DLGT
153
2.28%
UFGT
142
2.11%
CAS
137
2.04%
STR
135
2.01%
CAD
125
1.86%
SMT1/SMT2/SMT3
122
1.82%
CODM/T6ODM
119
1.77%
IFR
118
1.76%
TPS
111
1.65%
TRI/TRII
108
1.61%
CYP71
108
1.61%
GS
104
1.55%
GES
100
1.49%
F3'H/CYP75B
94
1.4%
SGD
88
1.31%
H6H
85
1.26%
BR6OX2/CYP85A2
81
1.21%
COMT
79
1.18%
RAS
69
1.03%
HCT
60
0.89%
TAT
60
0.89%
CYP90D1
55
0.82%
G8O/G8H
50
0.74%
F3'5'H/CYP75A
49
0.73%
7DLH
48
0.71%
CCR
47
0.7%
PMT
46
0.68%
8HGO
46
0.68%
LAC
46
0.68%
GGPPS
45
0.67%
T16H
43
0.64%
COR
43
0.64%
AACT
41
0.61%
CSE
39
0.58%
16OMT
38
0.57%
ANR
38
0.57%
LAMT
37
0.55%
IO
33
0.49%
CPD/CYP90A1
33
0.49%
CNMT
32
0.48%
SLS
31
0.46%
PYKS
29
0.43%
FNS
28
0.42%
CCoAOMT
28
0.42%
DFR
27
0.4%
SQS/FDFT1
27
0.4%
NCS
23
0.34%
MPO
23
0.34%
ANS/LDOX
20
0.3%
DXS
20
0.3%
HPPR
19
0.28%
ROT3/CYP90C1
19
0.28%
SQE
19
0.28%
BR6OX1/CYP85A1
19
0.28%
FPPS
19
0.28%
BBE
16
0.24%
CPR
16
0.24%
MCT/IspD
16
0.24%
TYDC_DDC
15
0.22%
F5H/CYP84A
15
0.22%
MVK
14
0.21%
CHS
13
0.19%
CHI
13
0.19%
HDS/IspG
13
0.19%
ISY
12
0.18%
PAL
12
0.18%
CYP51G1
12
0.18%
CYP719
11
0.16%
CYP80B1
10
0.15%
FK
10
0.15%
DXR
10
0.15%
HYD1
9
0.13%
HMGR
9
0.13%
XMT_MXMT_DXMT
8
0.12%
MVD
8
0.12%
FLS
7
0.1%
TDC
6
0.09%
6OMT_4OMT_SOMT
6
0.09%
HDR/IspH
6
0.09%
ADC
5
0.07%
ODC
4
0.06%
DET2
4
0.06%
SMO1/SMO2
4
0.06%
DWF7
3
0.04%
CPI1
3
0.04%
MDS/IspF
3
0.04%
DWF1
2
0.03%
HMGS
2
0.03%
PMK
2
0.03%
CMK/IspE
2
0.03%
DWF5
1
0.01%
IDI
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 903 | 19 | BAHD (430) | View species results |
| Alkaloid pathway | 751 | 28 | NMT (137) | View species results |
| Phenylpropanoid pathway | 570 | 11 | POD (225) | View species results |
| Flavonoid pathway | 274 | 13 | UFGT (130) | View species results |
| Rosmarinic acid pathway | 268 | 7 | C4H (72) | View species results |
| Steroid pathway | 264 | 13 | CAS (124) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2075 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 614 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Abuxscaffold55350230430.2 | Alkaloid | STR | low | borderline |
| Abuxscaffold55350230430.3 | Alkaloid | STR | low | borderline |
| Abuxscaffold55350230460.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold55350231430.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold55410233660.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold56330238050.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold62630242380.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold67130245020.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold67130245030.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold77370249240.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold77370249240.2 | Alkaloid | STR | medium | pass |
| Abuxscaffold77370249240.3 | Alkaloid | STR | low | borderline |
| Abuxscaffold77370249240.4 | Alkaloid | STR | medium | pass |
| Abuxscaffold77370249480.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold80590254780.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold80590254780.2 | Alkaloid | STR | low | borderline |
| Abuxscaffold81930258160.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold81930258160.10 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.11 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.2 | Alkaloid | STR | low | borderline |
| Abuxscaffold81930258160.3 | Alkaloid | STR | low | borderline |
| Abuxscaffold81930258160.4 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.5 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.6 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.7 | Alkaloid | STR | low | borderline |
| Abuxscaffold81930258160.8 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258160.9 | Alkaloid | STR | medium | pass |
| Abuxscaffold81930258170.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold84910260260.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold84910260260.2 | Alkaloid | STR | low | borderline |
| Abuxscaffold85110261660.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold86730264200.1 | Alkaloid | STR | medium | pass |
| Abuxscaffold95270279050.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold96750282010.1 | Alkaloid | STR | low | borderline |
| Abuxscaffold96750282010.2 | Alkaloid | STR | low | borderline |
| Abuxscaffold96750282010.3 | Alkaloid | STR | low | borderline |
| Abuxscaffold96750282010.4 | Alkaloid | STR | low | borderline |
| Abuxscaffold96750282010.5 | Alkaloid | STR | medium | pass |
| Abuxscaffold121410010850.1 | Alkaloid | T16H | medium | borderline |
| Abuxscaffold123810014590.1 | Alkaloid | T16H | medium | borderline |
| Abuxscaffold12970019120.1 | Alkaloid | T16H | low | borderline |
| Abuxscaffold161730054640.1 | Alkaloid | T16H | medium | borderline |
| Abuxscaffold170150062250.1 | Alkaloid | T16H | medium | borderline |
| Abuxscaffold196670077220.2 | Alkaloid | T16H | low | borderline |
| Abuxscaffold196670077230.1 | Alkaloid | T16H | low | borderline |
| Abuxscaffold2119700102370.3 | Alkaloid | T16H | medium | borderline |
| Abuxscaffold2121540102880.1 | Alkaloid | T16H | medium | pass |
| Abuxscaffold21721_10108750.1 | Alkaloid | T16H | low | borderline |
| Abuxscaffold26190147380.1 | Alkaloid | T16H | medium | pass |
| Abuxscaffold271950158900.1 | Alkaloid | T16H | medium | borderline |