Avena sativa (avena_sativa)
Imported from atlas release summary for Avena sativa.
6550
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
6550
Candidate Genes
C4H
6.7%
C3'H/CYP98A
6.7%
BAHD
5.85%
UGT
4.48%
POD
4.36%
7DLGT
4.16%
UFGT
4.12%
CYP76
3.83%
Other Families
59.8%
More Families (98)
T3O
591
3.81%
IFS
582
3.75%
4CL
417
2.68%
BR6OX2/CYP85A2
397
2.56%
DWF4/CYP90B1
370
2.38%
F3'H/CYP75B
360
2.32%
F3H
306
1.97%
NMT
292
1.88%
CYP71
253
1.63%
SMT1/SMT2/SMT3
237
1.53%
PYKS
225
1.45%
STR
225
1.45%
CSE
182
1.17%
PMT
178
1.15%
CAS
177
1.14%
CODM/T6ODM
175
1.13%
CAD
173
1.11%
TPS
172
1.11%
SGD
168
1.08%
PAL
162
1.04%
GES
152
0.98%
SLS
143
0.92%
COMT
142
0.91%
H6H
138
0.89%
G8O/G8H
135
0.87%
TRI/TRII
133
0.86%
RAS
132
0.85%
FNS
126
0.81%
CYP90D1
121
0.78%
HCT
118
0.76%
16OMT
111
0.71%
LAC
111
0.71%
T16H
109
0.7%
ANR
108
0.7%
CCR
105
0.68%
CHS
95
0.61%
IFR
94
0.61%
CYP51G1
90
0.58%
GS
79
0.51%
LAMT
74
0.48%
F3'5'H/CYP75A
71
0.46%
IO
70
0.45%
NCS
69
0.44%
BBE
60
0.39%
DFR
55
0.35%
CPD/CYP90A1
55
0.35%
BR6OX1/CYP85A1
53
0.34%
COR
52
0.33%
CYP719
45
0.29%
7DLH
44
0.28%
F5H/CYP84A
41
0.26%
8HGO
38
0.24%
CNMT
38
0.24%
ROT3/CYP90C1
37
0.24%
TYDC_DDC
36
0.23%
TAT
35
0.23%
SMO1/SMO2
30
0.19%
FPPS
30
0.19%
CPR
29
0.19%
CYP80B1
28
0.18%
ANS/LDOX
28
0.18%
HPPR
24
0.15%
AACT
22
0.14%
6OMT_4OMT_SOMT
20
0.13%
CCoAOMT
20
0.13%
XMT_MXMT_DXMT
19
0.12%
GGPPS
19
0.12%
HMGR
19
0.12%
SQS/FDFT1
18
0.12%
ADC
17
0.11%
DET2
17
0.11%
DWF1
16
0.1%
TDC
14
0.09%
MPO
13
0.08%
MVK
13
0.08%
HMGS
11
0.07%
MVD
11
0.07%
ISY
10
0.06%
SQE
10
0.06%
IDI
10
0.06%
ODC
9
0.06%
MCT/IspD
9
0.06%
FLS
7
0.05%
HYD1
7
0.05%
DXS
7
0.05%
CHI
6
0.04%
MDS/IspF
6
0.04%
DWF5
5
0.03%
DWF7
4
0.03%
FK
3
0.02%
CPI1
3
0.02%
DXR
3
0.02%
PMK
3
0.02%
CMK/IspE
3
0.02%
HDR/IspH
3
0.02%
HDS/IspG
3
0.02%
CYP80F1
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1840 | 20 | BAHD (699) | View species results |
| Alkaloid pathway | 1497 | 25 | 7DLGT (315) | View species results |
| Phenylpropanoid pathway | 1320 | 12 | POD (640) | View species results |
| Flavonoid pathway | 943 | 14 | UFGT (612) | View species results |
| Rosmarinic acid pathway | 600 | 7 | C4H (321) | View species results |
| Steroid pathway | 350 | 12 | SMT1/SMT2/SMT3 (163) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 6273 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 1158 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| AVESA.00010b.r1.1AG0002700.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.1AG0034200.2 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.1AG0076270.1 | Phenylpropanoid | CCR | medium | pass | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.1CG0109190.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00007__sp_Q9CA28_TKPR2_ARATH |
| AVESA.00010b.r1.1DG0153120.2 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.2AG0249750.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00004__sp_G7JEE5_CCR2_MEDTR |
| AVESA.00010b.r1.2AG0249760.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.2AG0249770.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.2AG0249780.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.2AG0258760.1 | Phenylpropanoid | CCR | medium | pass | CCR__00008__sp_Q9S9N9_CCR1_ARATH |
| AVESA.00010b.r1.2AG0258780.1 | Phenylpropanoid | CCR | medium | pass | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.2CG0269100.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.2DG0381560.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.3AG0408030.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00007__sp_Q9CA28_TKPR2_ARATH |
| AVESA.00010b.r1.3AG0439610.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.3AG0439880.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.3CG0455400.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00007__sp_Q9CA28_TKPR2_ARATH |
| AVESA.00010b.r1.3CG0469330.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.3CG0469600.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.3CG0505640.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.3DG0540130.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.3DG0540320.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| AVESA.00010b.r1.3DG0552050.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.4CG1285010.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.4CG1316300.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5AG0808560.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5AG0836620.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5AG0845080.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5AG0851430.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5AG0851440.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5AG0851450.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.5AG0851460.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00009__sp_Q9SAH9_CCR2_ARATH |
| AVESA.00010b.r1.5AG0851470.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| AVESA.00010b.r1.5AG0851480.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5AG0851500.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5AG0851510.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5AG0851520.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5AG0851530.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0866730.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5CG0869710.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0870530.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0882560.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0882570.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| AVESA.00010b.r1.5CG0882600.3 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0882610.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00008__sp_Q9S9N9_CCR1_ARATH |
| AVESA.00010b.r1.5CG0882620.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00004__sp_G7JEE5_CCR2_MEDTR |
| AVESA.00010b.r1.5CG0882630.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0882640.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0889240.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| AVESA.00010b.r1.5CG0898340.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00008__sp_Q9S9N9_CCR1_ARATH |