PlantSME Plant secondary metabolism enzyme database

Averrhoa carambola (averrhoa_carambola)

Imported from atlas release summary for Averrhoa carambola.

1609
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.21% Alkaloid pathway 22.68% Phenylpropanoid pathway 18.65% Flavonoid pathway 15.79% Rosmarinic acid pathway 8.45% Steroid pathway 5.22%
Family Distribution
C4H 6.39% C3'H/CYP98A 5.92% UGT 5.24% 7DLGT 4.68% UFGT 4.66% BAHD 4.23% IFS 4.08% CYP76 3.5%
Other Families 61.3%
More Families (97)
4CL 132 3.32% T3O 131 3.3% F3H 123 3.1% POD 121 3.05% DWF4/CYP90B1 98 2.47% CODM/T6ODM 76 1.91% CAD 70 1.76% NMT 66 1.66% STR 65 1.64% F3'H/CYP75B 64 1.61% CYP71 62 1.56% H6H 61 1.54% BR6OX2/CYP85A2 59 1.49% TPS 57 1.44% BBE 55 1.38% CAS 54 1.36% COMT 48 1.21% GES 46 1.16% TRI/TRII 40 1.01% PYKS 40 1.01% SMT1/SMT2/SMT3 39 0.98% CYP90D1 39 0.98% G8O/G8H 35 0.88% IFR 34 0.86% T16H 33 0.83% GS 31 0.78% 16OMT 31 0.78% CSE 31 0.78% IO 29 0.73% SGD 29 0.73% LAC 29 0.73% TAT 28 0.7% HCT 27 0.68% 7DLH 25 0.63% FNS 25 0.63% CHS 25 0.63% SLS 24 0.6% ANR 24 0.6% LAMT 23 0.58% F3'5'H/CYP75A 20 0.5% CCR 20 0.5% PMT 19 0.48% F5H/CYP84A 19 0.48% CPD/CYP90A1 19 0.48% RAS 18 0.45% CYP51G1 18 0.45% BR6OX1/CYP85A1 18 0.45% COR 15 0.38% NCS 14 0.35% ROT3/CYP90C1 14 0.35% 8HGO 12 0.3% DFR 12 0.3% PAL 12 0.3% CYP719 11 0.28% 6OMT_4OMT_SOMT 11 0.28% CNMT 9 0.23% TYDC_DDC 9 0.23% MPO 9 0.23% ANS/LDOX 9 0.23% ISY 7 0.18% CCoAOMT 7 0.18% DET2 7 0.18% FPPS 7 0.18% HPPR 6 0.15% SQE 6 0.15% XMT_MXMT_DXMT 5 0.13% SQS/FDFT1 5 0.13% AACT 5 0.13% GGPPS 5 0.13% CPR 4 0.1% DWF1 4 0.1% CYP80F1 3 0.08% CHI 3 0.08% FLS 3 0.08% SMO1/SMO2 3 0.08% PMK 3 0.08% MVK 3 0.08% DXS 3 0.08% MVD 3 0.08% CYP80B1 2 0.05% TDC 2 0.05% DWF7 2 0.05% FK 2 0.05% CMK/IspE 2 0.05% HDS/IspG 2 0.05% MCT/IspD 2 0.05% HMGR 2 0.05% ADC 1 0.03% ODC 1 0.03% CPI1 1 0.03% HYD1 1 0.03% DWF5 1 0.03% HDR/IspH 1 0.03% DXR 1 0.03% IDI 1 0.03% MDS/IspF 1 0.03% HMGS 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 470 19 UGT (195) View species results
Alkaloid pathway 365 24 7DLGT (85) View species results
Phenylpropanoid pathway 300 12 POD (118) View species results
Flavonoid pathway 254 10 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (66) View species results
Steroid pathway 84 10 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1513 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 213 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 6OMT_4OMT_SOMT
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Gene Pathway Family Confidence Status Best Target
Acar10G0002580.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Acar10G0002600.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Acar10G0003840.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar10G0003850.1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Acar10G0003860.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar10G0003920.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Acar11G0012250.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar11G0012260.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar11G0012520.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar11G0012530.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
Acar11G0012540.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO