Benincasa hispida (benincasa_hispida)
Imported from atlas release summary for Benincasa hispida.
1311
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1311
Candidate Genes
C4H
7.3%
C3'H/CYP98A
6.0%
CYP76
5.04%
BAHD
4.82%
UGT
4.27%
IFS
4.21%
4CL
4.02%
7DLGT
3.73%
Other Families
60.61%
More Families (96)
UFGT
116
3.7%
POD
105
3.35%
T3O
100
3.19%
DWF4/CYP90B1
71
2.26%
F3H
68
2.17%
NMT
65
2.07%
F3'H/CYP75B
61
1.95%
PAL
51
1.63%
STR
44
1.4%
BR6OX2/CYP85A2
44
1.4%
H6H
43
1.37%
TPS
43
1.37%
CAD
38
1.21%
SMT1/SMT2/SMT3
37
1.18%
TRI/TRII
36
1.15%
CODM/T6ODM
35
1.12%
GES
35
1.12%
CAS
35
1.12%
IO
34
1.08%
IFR
33
1.05%
G8O/G8H
32
1.02%
COMT
31
0.99%
CYP90D1
31
0.99%
T16H
29
0.93%
BBE
26
0.83%
LAC
25
0.8%
F5H/CYP84A
25
0.8%
HCT
24
0.77%
16OMT
23
0.73%
RAS
23
0.73%
CYP71
23
0.73%
GS
22
0.7%
SGD
22
0.7%
SLS
21
0.67%
F3'5'H/CYP75A
21
0.67%
CCR
21
0.67%
CSE
21
0.67%
PYKS
19
0.61%
TAT
19
0.61%
CPD/CYP90A1
19
0.61%
CYP51G1
19
0.61%
PMT
18
0.57%
FNS
18
0.57%
ANR
17
0.54%
BR6OX1/CYP85A1
17
0.54%
CNMT
15
0.48%
NCS
13
0.41%
8HGO
12
0.38%
COR
12
0.38%
DFR
12
0.38%
DXS
10
0.32%
LAMT
9
0.29%
ROT3/CYP90C1
9
0.29%
CYP719
8
0.26%
CYP80B1
8
0.26%
HPPR
8
0.26%
AACT
8
0.26%
7DLH
7
0.22%
ANS/LDOX
7
0.22%
MPO
6
0.19%
CHS
6
0.19%
CPR
6
0.19%
FPPS
6
0.19%
SQS/FDFT1
5
0.16%
GGPPS
5
0.16%
6OMT_4OMT_SOMT
4
0.13%
CHI
4
0.13%
CCoAOMT
4
0.13%
DWF1
4
0.13%
SQE
4
0.13%
DET2
4
0.13%
HMGR
4
0.13%
XMT_MXMT_DXMT
3
0.1%
FLS
3
0.1%
MVK
3
0.1%
MVD
3
0.1%
HDR/IspH
3
0.1%
ODC
2
0.06%
TYDC_DDC
2
0.06%
ISY
2
0.06%
CPI1
2
0.06%
SMO1/SMO2
2
0.06%
PMK
2
0.06%
TDC
1
0.03%
ADC
1
0.03%
HYD1
1
0.03%
DWF7
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
MDS/IspF
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
MCT/IspD
1
0.03%
IDI
1
0.03%
HDS/IspG
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 384 | 18 | UGT (123) | View species results |
| Alkaloid pathway | 270 | 23 | 7DLGT (60) | View species results |
| Phenylpropanoid pathway | 256 | 11 | POD (101) | View species results |
| Flavonoid pathway | 183 | 7 | UFGT (108) | View species results |
| Rosmarinic acid pathway | 148 | 7 | C4H (66) | View species results |
| Steroid pathway | 70 | 11 | CAS (32) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1286 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 198 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bhis08G0013890.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Bhis09G0004580.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Bhis09G0004600.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Bhis09G0004620.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Bhis09G0022440.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Bhis09G0024020.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis09G0024030.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis09G0024080.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis09G0024090.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis09G0024110.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis09G0024170.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Bhis10G0012450.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Bhis10G0016670.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Bhis11G0002340.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis11G0005690.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Bhis11G0010880.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Bhis11G0012340.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Bhis11G0017620.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Bhis12G0001310.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Bhis12G0002330.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Bhis12G0004590.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Bhis12G0009910.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Bhis12G0010280.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Bhis12G0018790.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| BhisGWHAAAR000001530005270.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BhisGWHAAAR000001530005320.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |