PlantSME Plant secondary metabolism enzyme database

Botryococcus braunii (botryococcus_braunii)

Imported from atlas release summary for Botryococcus braunii.

248
Candidate Genes
92
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 30.24% Terpenoid pathway 24.6% Steroid pathway 17.34% Phenylpropanoid pathway 14.92% Rosmarinic acid pathway 7.26% Flavonoid pathway 5.65%
Family Distribution
C4H 9.63% C3'H/CYP98A 5.81% CYP76 5.45% 4CL 5.18% STR 4.81% NMT 4.54% BAHD 4.27% DWF4/CYP90B1 3.54%
Other Families 56.77%
More Families (84)
IFS 34 3.09% IFR 29 2.63% CYP719 25 2.27% POD 25 2.27% T3O 24 2.18% CYP90D1 22 2.0% FNS 21 1.91% SMT1/SMT2/SMT3 21 1.91% GS 20 1.82% PYKS 18 1.63% CNMT 17 1.54% 7DLGT 16 1.45% UFGT 16 1.45% TRI/TRII 15 1.36% IO 15 1.36% CYP71 15 1.36% F3'5'H/CYP75A 13 1.18% CSE 13 1.18% SGD 12 1.09% F3'H/CYP75B 12 1.09% UGT 12 1.09% BR6OX2/CYP85A2 11 1.0% CAD 10 0.91% CYP80B1 9 0.82% CPD/CYP90A1 9 0.82% TAT 8 0.73% SQE 8 0.73% SQS/FDFT1 8 0.73% COR 7 0.64% SLS 7 0.64% LAMT 7 0.64% AACT 7 0.64% TDC 6 0.54% ANR 6 0.54% COMT 6 0.54% CAS 6 0.54% 6OMT_4OMT_SOMT 5 0.45% CPR 5 0.45% MCT/IspD 5 0.45% FPPS 5 0.45% 7DLH 4 0.36% ODC 4 0.36% G8O/G8H 4 0.36% F3H 4 0.36% LAC 4 0.36% BR6OX1/CYP85A1 4 0.36% DET2 4 0.36% ROT3/CYP90C1 4 0.36% GGPPS 4 0.36% DXS 4 0.36% MPO 3 0.27% DFR 3 0.27% CHS 3 0.27% PAL 3 0.27% CCoAOMT 3 0.27% CCR 3 0.27% CPI1 3 0.27% TYDC_DDC 2 0.18% H6H 2 0.18% T16H 2 0.18% PMT 2 0.18% XMT_MXMT_DXMT 2 0.18% BBE 2 0.18% CYP51G1 2 0.18% NCS 1 0.09% 16OMT 1 0.09% ADC 1 0.09% CYP80F1 1 0.09% ISY 1 0.09% CODM/T6ODM 1 0.09% GES 1 0.09% F5H/CYP84A 1 0.09% HCT 1 0.09% HPPR 1 0.09% HYD1 1 0.09% SMO1/SMO2 1 0.09% DWF5 1 0.09% FK 1 0.09% MDS/IspF 1 0.09% HMGS 1 0.09% HDR/IspH 1 0.09% MVD 1 0.09% DXR 1 0.09% HDS/IspG 1 0.09%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 75 12 NMT (20) View species results
Terpenoid pathway 61 12 BAHD (27) View species results
Steroid pathway 43 10 SMT1/SMT2/SMT3 (15) View species results
Phenylpropanoid pathway 37 6 POD (20) View species results
Rosmarinic acid pathway 18 4 TAT (7) View species results
Flavonoid pathway 14 4 4CL (5) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 487 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 2 48 BAHD, HCT
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
Bbrascaffold_1270019950.1 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Bbrascaffold_146_10034960.1 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Bbrascaffold_1790065570.1 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Bbrascaffold_1830071730.1 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Bbrascaffold_1860074000.1 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Bbrascaffold_1870074510.1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Bbrascaffold_1950078420.1 Alkaloid TRI/TRII low borderline TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Bbrascaffold_220090900.1 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Bbrascaffold_3150116250.1 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Bbrascaffold_357_20132530.1 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Bbrascaffold_3610134290.1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Bbrascaffold_3660137010.1 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
Bbrascaffold_384_20142740.1 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
Bbrascaffold_840195200.1 Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Bbrascaffold_890197320.1 Alkaloid TRI/TRII low borderline TRI_TRII__00001__sp_A7DY56_TRN1_COCOF