Botryococcus braunii (botryococcus_braunii)
Imported from atlas release summary for Botryococcus braunii.
248
Family-Level Assignments
92
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
248
Family-Level Assignments
C4H
9.63%
C3'H/CYP98A
5.81%
CYP76
5.45%
4CL
5.18%
STR
4.81%
NMT
4.54%
BAHD
4.27%
DWF4/CYP90B1
3.54%
Other Families
56.77%
More Families (84)
IFS
34
3.09%
IFR
29
2.63%
CYP719
25
2.27%
POD
25
2.27%
T3O
24
2.18%
CYP90D1
22
2.0%
FNS
21
1.91%
SMT1/SMT2/SMT3
21
1.91%
GS
20
1.82%
PYKS
18
1.63%
CNMT
17
1.54%
7DLGT
16
1.45%
UFGT
16
1.45%
TRI/TRII
15
1.36%
IO
15
1.36%
CYP71
15
1.36%
F3'5'H/CYP75A
13
1.18%
CSE
13
1.18%
SGD
12
1.09%
F3'H/CYP75B
12
1.09%
UGT
12
1.09%
BR6OX2/CYP85A2
11
1.0%
CAD
10
0.91%
CYP80B1
9
0.82%
CPD/CYP90A1
9
0.82%
TAT
8
0.73%
SQE
8
0.73%
SQS/FDFT1
8
0.73%
COR
7
0.64%
SLS
7
0.64%
LAMT
7
0.64%
AACT
7
0.64%
TDC
6
0.54%
ANR
6
0.54%
COMT
6
0.54%
CAS
6
0.54%
6OMT_4OMT_SOMT
5
0.45%
CPR
5
0.45%
MCT/IspD
5
0.45%
FPPS
5
0.45%
7DLH
4
0.36%
ODC
4
0.36%
G8O/G8H
4
0.36%
F3H
4
0.36%
LAC
4
0.36%
BR6OX1/CYP85A1
4
0.36%
DET2
4
0.36%
ROT3/CYP90C1
4
0.36%
GGPPS
4
0.36%
DXS
4
0.36%
MPO
3
0.27%
DFR
3
0.27%
CHS
3
0.27%
PAL
3
0.27%
CCoAOMT
3
0.27%
CCR
3
0.27%
CPI1
3
0.27%
TYDC_DDC
2
0.18%
H6H
2
0.18%
T16H
2
0.18%
PMT
2
0.18%
XMT_MXMT_DXMT
2
0.18%
BBE
2
0.18%
CYP51G1
2
0.18%
NCS
1
0.09%
16OMT
1
0.09%
ADC
1
0.09%
CYP80F1
1
0.09%
ISY
1
0.09%
CODM/T6ODM
1
0.09%
GES
1
0.09%
F5H/CYP84A
1
0.09%
HCT
1
0.09%
HPPR
1
0.09%
HYD1
1
0.09%
SMO1/SMO2
1
0.09%
DWF5
1
0.09%
FK
1
0.09%
MDS/IspF
1
0.09%
HMGS
1
0.09%
HDR/IspH
1
0.09%
MVD
1
0.09%
DXR
1
0.09%
HDS/IspG
1
0.09%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Family-Level Assignments | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 75 | 12 | NMT (20) | View species results |
| Terpenoid pathway | 61 | 12 | BAHD (27) | View species results |
| Steroid pathway | 43 | 10 | SMT1/SMT2/SMT3 (15) | View species results |
| Phenylpropanoid pathway | 37 | 6 | POD (20) | View species results |
| Rosmarinic acid pathway | 18 | 4 | TAT (7) | View species results |
| Flavonoid pathway | 14 | 4 | 4CL (5) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Family-level assignments | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 487 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 2 | 48 | BAHD, HCT |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Bbrascaffold_120016410.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_1320021830.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_1320021840.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_1320021850.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_1690057160.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_2060084020.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_2180088810.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_2180088810.2 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_2180088810.4 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_30111830.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_341_20126800.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_341_20126820.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_341_20126940.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_3670137680.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_40_10149550.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_6540178130.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_720185130.1 | Alkaloid | PYKS | low | borderline |
| Bbrascaffold_150038570.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_3300121210.1 | Alkaloid | SGD | low | borderline |
| Bbrascaffold_3630134890.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_3630134890.2 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_40_10149910.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_40_10149910.2 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_40_10149910.3 | Alkaloid | SGD | low | borderline |
| Bbrascaffold_440154970.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_440154980.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_690182320.2 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_690182330.1 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_690182330.2 | Alkaloid | SGD | medium | pass |
| Bbrascaffold_1320022060.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_174_10060570.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_2140086680.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_3160116410.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_3160116410.2 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_720184770.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_8510195640.1 | Alkaloid | SLS | medium | borderline |
| Bbrascaffold_1240018030.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1320022520.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1320022520.2 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1320022520.3 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1320022520.4 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1320022520.5 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1380027400.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1380027400.2 | Alkaloid | STR | low | borderline |
| Bbrascaffold_150_20039480.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_150_20039480.2 | Alkaloid | STR | low | borderline |
| Bbrascaffold_150_20039510.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1560044110.1 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1560044110.2 | Alkaloid | STR | low | borderline |
| Bbrascaffold_1610049410.1 | Alkaloid | STR | low | borderline |