PlantSME Plant secondary metabolism enzyme database

Brachythecium roeteanum (brachythecium_roeteanum)

Imported from atlas release summary for Brachythecium roeteanum.

941
Candidate Protein Records
664
Pathway-Level Records
1743
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 27.11% Terpenoid pathway 25.75% Alkaloid pathway 18.67% Flavonoid pathway 13.25% Rosmarinic acid pathway 8.58% Steroid pathway 6.63%
Family Distribution
C4H 6.88% POD 5.74% C3'H/CYP98A 5.45% BAHD 5.22% CYP76 4.36% 4CL 4.13% NMT 3.84% F3H 2.47%
Other Families 61.9%
More Families (95)
IFS 42 2.41% F3'H/CYP75B 42 2.41% BR6OX2/CYP85A2 39 2.24% STR 37 2.12% DWF4/CYP90B1 37 2.12% UGT 37 2.12% 7DLGT 36 2.07% GS 36 2.07% PAL 36 2.07% T3O 35 2.01% UFGT 34 1.95% IFR 33 1.89% PYKS 29 1.66% COMT 27 1.55% IO 26 1.49% H6H 23 1.32% G8O/G8H 21 1.2% CHS 21 1.2% CODM/T6ODM 20 1.15% CAD 20 1.15% SMT1/SMT2/SMT3 20 1.15% CYP71 20 1.15% TRI/TRII 19 1.09% CAS 19 1.09% F3'5'H/CYP75A 18 1.03% CSE 17 0.98% SLS 15 0.86% 16OMT 15 0.86% LAMT 14 0.8% NCS 14 0.8% LAC 11 0.63% HCT 11 0.63% SGD 9 0.52% CYP80B1 9 0.52% BBE 9 0.52% T16H 9 0.52% RAS 9 0.52% CPD/CYP90A1 9 0.52% CYP90D1 9 0.52% 8HGO 8 0.46% BR6OX1/CYP85A1 8 0.46% COR 7 0.4% PMT 7 0.4% ANR 7 0.4% FNS 7 0.4% F5H/CYP84A 7 0.4% CCR 7 0.4% CPR 7 0.4% MPO 6 0.34% 7DLH 6 0.34% SQS/FDFT1 6 0.34% TPS 6 0.34% GGPPS 6 0.34% CNMT 5 0.29% DFR 5 0.29% AACT 5 0.29% TYDC_DDC 4 0.23% CHI 4 0.23% TAT 4 0.23% ROT3/CYP90C1 4 0.23% DWF5 4 0.23% DET2 4 0.23% MVK 4 0.23% 6OMT_4OMT_SOMT 3 0.17% TDC 3 0.17% GES 3 0.17% SQE 3 0.17% MVD 3 0.17% HDS/IspG 3 0.17% ISY 2 0.11% ADC 2 0.11% ANS/LDOX 2 0.11% FLS 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% IDI 2 0.11% MCT/IspD 2 0.11% FPPS 2 0.11% HDR/IspH 2 0.11% CYP719 1 0.06% XMT_MXMT_DXMT 1 0.06% HPPR 1 0.06% FK 1 0.06% DWF7 1 0.06% CYP51G1 1 0.06% DWF1 1 0.06% CPI1 1 0.06% HYD1 1 0.06% HMGS 1 0.06% CMK/IspE 1 0.06% HMGR 1 0.06% DXS 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 180 10 POD (91) View species results
Terpenoid pathway 171 19 BAHD (63) View species results
Alkaloid pathway 124 16 NMT (27) View species results
Flavonoid pathway 88 9 UFGT (32) View species results
Rosmarinic acid pathway 57 7 C4H (22) View species results
Steroid pathway 44 13 CAS (19) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 649 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 111 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Broe2148960157880 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
Broe2150970173860 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2150970173870 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2153240186680 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Broe2159540234240 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2159950237690 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Broe2161560249190 Terpenoid UGT low borderline UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
Broe2162360255040 Terpenoid UGT low borderline UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2162360255070 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2162360255080 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2162380255100 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2162760257110 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2163470261450 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2163470261460 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2164620266340 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Broe2164620266350 Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH