PlantSME Plant secondary metabolism enzyme database

Bruguiera parviflora (bruguiera_parviflora)

/

Imported from atlas release summary for Bruguiera parviflora.

1110
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.19% Alkaloid pathway 21.17% Phenylpropanoid pathway 20.54% Flavonoid pathway 13.69% Rosmarinic acid pathway 9.37% Steroid pathway 6.04%
Family Distribution
BAHD 6.42% C4H 6.24% C3'H/CYP98A 5.89% 4CL 4.63% POD 4.17% CYP76 3.79% IFS 3.68% UGT 3.58%
Other Families 61.61%
More Families (96)
UFGT 93 3.26% T3O 92 3.23% 7DLGT 90 3.16% F3H 80 2.81% NMT 73 2.56% DWF4/CYP90B1 65 2.28% CODM/T6ODM 53 1.86% F3'H/CYP75B 53 1.86% STR 50 1.75% CAD 41 1.44% IFR 39 1.37% CYP71 37 1.3% H6H 36 1.26% SMT1/SMT2/SMT3 36 1.26% BR6OX2/CYP85A2 36 1.26% CYP90D1 35 1.23% CAS 34 1.19% TRI/TRII 32 1.12% PYKS 30 1.05% HCT 30 1.05% LAC 29 1.02% TPS 29 1.02% PMT 28 0.98% GES 28 0.98% CSE 25 0.88% GS 24 0.84% T16H 24 0.84% SGD 23 0.81% ANR 23 0.81% IO 22 0.77% G8O/G8H 22 0.77% COMT 22 0.77% TAT 22 0.77% FNS 20 0.7% F3'5'H/CYP75A 18 0.63% SLS 17 0.6% 7DLH 17 0.6% CCR 17 0.6% RAS 16 0.56% COR 15 0.53% PAL 15 0.53% CYP51G1 14 0.49% 16OMT 11 0.39% BR6OX1/CYP85A1 11 0.39% BBE 10 0.35% F5H/CYP84A 10 0.35% CPD/CYP90A1 10 0.35% 8HGO 9 0.32% ROT3/CYP90C1 9 0.32% CHS 8 0.28% CPR 8 0.28% AACT 8 0.28% NCS 7 0.25% LAMT 7 0.25% CYP80B1 7 0.25% ANS/LDOX 7 0.25% DFR 7 0.25% CCoAOMT 7 0.25% GGPPS 7 0.25% CYP719 6 0.21% CNMT 6 0.21% HPPR 6 0.21% MPO 5 0.18% SQS/FDFT1 5 0.18% MVD 5 0.18% DXS 5 0.18% TDC 4 0.14% XMT_MXMT_DXMT 4 0.14% SMO1/SMO2 4 0.14% MVK 4 0.14% MCT/IspD 4 0.14% FPPS 4 0.14% ADC 3 0.11% TYDC_DDC 3 0.11% DET2 3 0.11% HYD1 3 0.11% HDR/IspH 3 0.11% 6OMT_4OMT_SOMT 2 0.07% ISY 2 0.07% FLS 2 0.07% CHI 2 0.07% DWF7 2 0.07% DWF5 2 0.07% SQE 2 0.07% HMGR 2 0.07% IDI 2 0.07% DXR 2 0.07% HDS/IspG 2 0.07% MDS/IspF 2 0.07% HMGS 2 0.07% CYP80F1 1 0.04% FK 1 0.04% DWF1 1 0.04% CPI1 1 0.04% CMK/IspE 1 0.04% PMK 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 324 19 BAHD (137) View species results
Alkaloid pathway 235 19 7DLGT (37) View species results
Phenylpropanoid pathway 228 11 POD (97) View species results
Flavonoid pathway 152 10 UFGT (87) View species results
Rosmarinic acid pathway 104 7 C4H (34) View species results
Steroid pathway 67 12 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1065 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 229 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 16OMT
Reset
Gene Pathway Family Confidence Status Best Target
bruguiera_parviflora_evm.model.Scaffold_1.536 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_1.581 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_1.582 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_12.569 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_12.570 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_2.1382 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_5.1010 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_5.1067 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_5.1068 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_8.456 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
bruguiera_parviflora_evm.model.Scaffold_9.1052 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO