PlantSME Plant secondary metabolism enzyme database

Bruguiera parviflora (bruguiera_parviflora)

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Imported from atlas release summary for Bruguiera parviflora.

1110
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.19% Alkaloid pathway 21.17% Phenylpropanoid pathway 20.54% Flavonoid pathway 13.69% Rosmarinic acid pathway 9.37% Steroid pathway 6.04%
Family Distribution
BAHD 6.42% C4H 6.24% C3'H/CYP98A 5.89% 4CL 4.63% POD 4.17% CYP76 3.79% IFS 3.68% UGT 3.58%
Other Families 61.61%
More Families (96)
UFGT 93 3.26% T3O 92 3.23% 7DLGT 90 3.16% F3H 80 2.81% NMT 73 2.56% DWF4/CYP90B1 65 2.28% CODM/T6ODM 53 1.86% F3'H/CYP75B 53 1.86% STR 50 1.75% CAD 41 1.44% IFR 39 1.37% CYP71 37 1.3% H6H 36 1.26% SMT1/SMT2/SMT3 36 1.26% BR6OX2/CYP85A2 36 1.26% CYP90D1 35 1.23% CAS 34 1.19% TRI/TRII 32 1.12% PYKS 30 1.05% HCT 30 1.05% LAC 29 1.02% TPS 29 1.02% PMT 28 0.98% GES 28 0.98% CSE 25 0.88% GS 24 0.84% T16H 24 0.84% SGD 23 0.81% ANR 23 0.81% IO 22 0.77% G8O/G8H 22 0.77% COMT 22 0.77% TAT 22 0.77% FNS 20 0.7% F3'5'H/CYP75A 18 0.63% SLS 17 0.6% 7DLH 17 0.6% CCR 17 0.6% RAS 16 0.56% COR 15 0.53% PAL 15 0.53% CYP51G1 14 0.49% 16OMT 11 0.39% BR6OX1/CYP85A1 11 0.39% BBE 10 0.35% F5H/CYP84A 10 0.35% CPD/CYP90A1 10 0.35% 8HGO 9 0.32% ROT3/CYP90C1 9 0.32% CHS 8 0.28% CPR 8 0.28% AACT 8 0.28% NCS 7 0.25% LAMT 7 0.25% CYP80B1 7 0.25% ANS/LDOX 7 0.25% DFR 7 0.25% CCoAOMT 7 0.25% GGPPS 7 0.25% CYP719 6 0.21% CNMT 6 0.21% HPPR 6 0.21% MPO 5 0.18% SQS/FDFT1 5 0.18% MVD 5 0.18% DXS 5 0.18% TDC 4 0.14% XMT_MXMT_DXMT 4 0.14% SMO1/SMO2 4 0.14% MVK 4 0.14% MCT/IspD 4 0.14% FPPS 4 0.14% ADC 3 0.11% TYDC_DDC 3 0.11% DET2 3 0.11% HYD1 3 0.11% HDR/IspH 3 0.11% 6OMT_4OMT_SOMT 2 0.07% ISY 2 0.07% FLS 2 0.07% CHI 2 0.07% DWF7 2 0.07% DWF5 2 0.07% SQE 2 0.07% HMGR 2 0.07% IDI 2 0.07% DXR 2 0.07% HDS/IspG 2 0.07% MDS/IspF 2 0.07% HMGS 2 0.07% CYP80F1 1 0.04% FK 1 0.04% DWF1 1 0.04% CPI1 1 0.04% CMK/IspE 1 0.04% PMK 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 324 19 BAHD (137) View species results
Alkaloid pathway 235 19 7DLGT (37) View species results
Phenylpropanoid pathway 228 11 POD (97) View species results
Flavonoid pathway 152 10 UFGT (87) View species results
Rosmarinic acid pathway 104 7 C4H (34) View species results
Steroid pathway 67 12 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1065 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 229 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
bruguiera_parviflora_evm.model.Scaffold_8.799 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
bruguiera_parviflora_evm.model.Scaffold_8.80 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
bruguiera_parviflora_evm.model.Scaffold_8.800 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
bruguiera_parviflora_evm.model.Scaffold_8.805 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
bruguiera_parviflora_evm.model.Scaffold_8.807 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
bruguiera_parviflora_evm.model.Scaffold_9.322 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
bruguiera_parviflora_evm.model.Scaffold_9.533 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
bruguiera_parviflora_evm.model.Scaffold_9.923 Terpenoid CYP76 low borderline CYP76__00005__sp_A0A125QZE2_C76K1_SALMI