PlantSME Plant secondary metabolism enzyme database

Bruguiera sexangula (bruguiera_sexangula)

Imported from atlas release summary for Bruguiera sexangula.

1275
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.75% Alkaloid pathway 21.88% Phenylpropanoid pathway 18.82% Flavonoid pathway 13.8% Rosmarinic acid pathway 8.86% Steroid pathway 5.88%
Family Distribution
BAHD 6.57% C4H 5.79% C3'H/CYP98A 5.73% 4CL 4.49% UGT 4.2% POD 3.77% 7DLGT 3.71% CYP76 3.64%
Other Families 62.1%
More Families (95)
UFGT 110 3.58% T3O 105 3.42% IFS 105 3.42% F3H 90 2.93% NMT 72 2.34% DWF4/CYP90B1 70 2.28% F3'H/CYP75B 55 1.79% CODM/T6ODM 54 1.76% STR 50 1.63% BR6OX2/CYP85A2 48 1.56% CAS 44 1.43% TPS 44 1.43% H6H 43 1.4% CAD 42 1.37% HCT 40 1.3% CYP90D1 40 1.3% GES 39 1.27% IFR 39 1.27% CYP71 38 1.24% SMT1/SMT2/SMT3 37 1.2% LAC 36 1.17% PMT 33 1.07% CSE 33 1.07% TRI/TRII 31 1.01% PYKS 30 0.98% IO 25 0.81% GS 24 0.78% SGD 24 0.78% ANR 21 0.68% TAT 21 0.68% T16H 20 0.65% COMT 19 0.62% CCR 19 0.62% F3'5'H/CYP75A 18 0.59% RAS 18 0.59% 7DLH 17 0.55% SLS 15 0.49% FNS 15 0.49% COR 14 0.46% NCS 13 0.42% G8O/G8H 12 0.39% ANS/LDOX 12 0.39% PAL 12 0.39% CPD/CYP90A1 12 0.39% CYP51G1 12 0.39% LAMT 10 0.33% CHS 10 0.33% DFR 10 0.33% F5H/CYP84A 10 0.33% AACT 10 0.33% 16OMT 9 0.29% 8HGO 9 0.29% BR6OX1/CYP85A1 9 0.29% ROT3/CYP90C1 9 0.29% 6OMT_4OMT_SOMT 7 0.23% CYP80B1 7 0.23% CNMT 7 0.23% BBE 7 0.23% CPR 7 0.23% MVD 7 0.23% FPPS 7 0.23% MPO 6 0.2% CYP719 5 0.16% CCoAOMT 5 0.16% HPPR 5 0.16% SQS/FDFT1 5 0.16% MVK 5 0.16% DXS 5 0.16% GGPPS 5 0.16% SMO1/SMO2 4 0.13% HDS/IspG 4 0.13% TDC 3 0.1% ADC 3 0.1% CHI 3 0.1% SQE 3 0.1% DET2 3 0.1% HYD1 3 0.1% DWF7 3 0.1% DWF5 3 0.1% IDI 3 0.1% DXR 3 0.1% HMGR 3 0.1% ISY 2 0.07% TYDC_DDC 2 0.07% XMT_MXMT_DXMT 2 0.07% DWF1 2 0.07% MCT/IspD 2 0.07% MDS/IspF 2 0.07% HMGS 2 0.07% HDR/IspH 2 0.07% CYP80F1 1 0.03% FK 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 392 20 BAHD (153) View species results
Alkaloid pathway 279 22 7DLGT (54) View species results
Phenylpropanoid pathway 240 11 POD (98) View species results
Flavonoid pathway 176 12 UFGT (98) View species results
Rosmarinic acid pathway 113 7 C4H (42) View species results
Steroid pathway 75 12 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1099 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 260 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
bruguiera_sexangula_evm.model.48629.2 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
bruguiera_sexangula_evm.model.Scaffold_11_RagTag.251 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
bruguiera_sexangula_evm.model.Scaffold_11_RagTag.252 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
bruguiera_sexangula_evm.model.Scaffold_1_RagTag.2192 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
bruguiera_sexangula_evm.model.Scaffold_3_RagTag.1356 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
bruguiera_sexangula_evm.model.Scaffold_4_RagTag.868 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.960 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
bruguiera_sexangula_evm.model.Scaffold_7_RagTag.1086 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
bruguiera_sexangula_evm.model.Scaffold_7_RagTag.225 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
bruguiera_sexangula_evm.model.Scaffold_8_RagTag.1514 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA