PlantSME Plant secondary metabolism enzyme database

Bryoxiphium norvegicum (bryoxiphium_norvegicum)

Imported from atlas release summary for Bryoxiphium norvegicum.

778
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 27.76% Terpenoid pathway 25.71% Alkaloid pathway 19.41% Flavonoid pathway 11.18% Rosmarinic acid pathway 9.38% Steroid pathway 6.56%
Family Distribution
C4H 7.67% C3'H/CYP98A 5.92% POD 5.58% BAHD 5.48% 4CL 4.66% CYP76 4.56% NMT 3.4% IFS 3.4%
Other Families 59.34%
More Families (96)
PAL 60 2.91% T3O 54 2.62% STR 53 2.57% BR6OX2/CYP85A2 51 2.47% F3'H/CYP75B 46 2.23% F3H 44 2.13% DWF4/CYP90B1 42 2.04% PYKS 35 1.7% IFR 35 1.7% G8O/G8H 34 1.65% CODM/T6ODM 33 1.6% UGT 32 1.55% F3'5'H/CYP75A 29 1.41% GS 28 1.36% T16H 28 1.36% CAD 26 1.26% 7DLGT 24 1.16% CHS 24 1.16% IO 23 1.12% CAS 21 1.02% UFGT 19 0.92% CYP71 19 0.92% LAC 18 0.87% H6H 17 0.82% COMT 17 0.82% SMT1/SMT2/SMT3 17 0.82% NCS 14 0.68% FNS 14 0.68% TRI/TRII 13 0.63% 7DLH 13 0.63% CSE 12 0.58% CYP90D1 12 0.58% 8HGO 11 0.53% CNMT 11 0.53% CCR 11 0.53% HCT 10 0.49% CPR 10 0.49% BR6OX1/CYP85A1 10 0.49% PMT 9 0.44% SGD 9 0.44% SLS 9 0.44% RAS 9 0.44% SQS/FDFT1 9 0.44% CPD/CYP90A1 9 0.44% CYP80B1 8 0.39% 16OMT 8 0.39% DFR 8 0.39% ANR 8 0.39% MPO 7 0.34% ANS/LDOX 7 0.34% F5H/CYP84A 7 0.34% SQE 7 0.34% FPPS 7 0.34% COR 6 0.29% GGPPS 6 0.29% TPS 6 0.29% TDC 5 0.24% ADC 5 0.24% DET2 5 0.24% AACT 5 0.24% LAMT 4 0.19% ISY 4 0.19% FLS 4 0.19% ROT3/CYP90C1 4 0.19% DWF1 4 0.19% DWF5 4 0.19% HDR/IspH 4 0.19% MVD 4 0.19% BBE 3 0.15% TYDC_DDC 3 0.15% CHI 3 0.15% TAT 3 0.15% SMO1/SMO2 3 0.15% IDI 3 0.15% MCT/IspD 3 0.15% DXS 3 0.15% HDS/IspG 3 0.15% MVK 3 0.15% PMK 3 0.15% CYP719 2 0.1% GES 2 0.1% XMT_MXMT_DXMT 2 0.1% 6OMT_4OMT_SOMT 2 0.1% HPPR 2 0.1% DWF7 2 0.1% CYP51G1 2 0.1% FK 2 0.1% MDS/IspF 2 0.1% DXR 2 0.1% CMK/IspE 2 0.1% HMGS 2 0.1% CCoAOMT 1 0.05% HYD1 1 0.05% CPI1 1 0.05% HMGR 1 0.05% GPPS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 216 12 POD (104) View species results
Terpenoid pathway 200 19 BAHD (88) View species results
Alkaloid pathway 151 18 NMT (34) View species results
Flavonoid pathway 87 11 CHS (23) View species results
Rosmarinic acid pathway 73 7 C4H (21) View species results
Steroid pathway 51 10 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 846 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 132 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
Reset
Gene Pathway Family Confidence Status
Bnorscaffold_100034140 Phenylpropanoid CCR medium borderline
Bnorscaffold_120081850 Phenylpropanoid CCR medium borderline
Bnorscaffold_240160610 Phenylpropanoid CCR medium pass
Bnorscaffold_30180840 Phenylpropanoid CCR medium borderline
Bnorscaffold_70267930 Phenylpropanoid CCR low borderline
Bnorscaffold_90310870 Phenylpropanoid CCR medium borderline
Bnorscaffold_90310900 Phenylpropanoid CCR low borderline
Bnorscaffold_90310930 Phenylpropanoid CCR medium borderline
Bnorscaffold_90312380 Phenylpropanoid CCR low borderline
Bnorscaffold_90319040 Phenylpropanoid CCR low borderline
Bnorscaffold_90332990 Phenylpropanoid CCR low borderline