PlantSME Plant secondary metabolism enzyme database

Buxus sinica (buxus_sinica)

Imported from atlas release summary for Buxus sinica.

1652
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.51% Phenylpropanoid pathway 24.15% Alkaloid pathway 21.79% Flavonoid pathway 10.77% Rosmarinic acid pathway 10.05% Steroid pathway 6.72%
Family Distribution
C4H 6.49% C3'H/CYP98A 5.96% BAHD 5.28% CYP76 4.04% POD 3.91% T3O 3.86% IFS 3.73% F3H 3.05%
Other Families 63.67%
More Families (96)
4CL 138 3.05% UGT 137 3.03% 7DLGT 125 2.76% UFGT 110 2.43% DWF4/CYP90B1 109 2.41% F3'H/CYP75B 100 2.21% CODM/T6ODM 95 2.1% NMT 87 1.92% CAD 86 1.9% BR6OX2/CYP85A2 85 1.88% H6H 82 1.81% CAS 78 1.72% HCT 65 1.44% TPS 62 1.37% CYP71 62 1.37% GES 61 1.35% COMT 57 1.26% LAC 54 1.19% CNMT 53 1.17% CSE 52 1.15% STR 51 1.13% CYP90D1 47 1.04% SMT1/SMT2/SMT3 45 0.99% T16H 44 0.97% SGD 43 0.95% ANR 41 0.91% LAMT 36 0.8% PMT 36 0.8% ANS/LDOX 36 0.8% F5H/CYP84A 36 0.8% TAT 36 0.8% RAS 35 0.77% G8O/G8H 34 0.75% 16OMT 34 0.75% IFR 34 0.75% TRI/TRII 32 0.71% IO 30 0.66% CCR 30 0.66% CYP51G1 30 0.66% GS 29 0.64% F3'5'H/CYP75A 28 0.62% FNS 27 0.6% SLS 23 0.51% 8HGO 21 0.46% PAL 21 0.46% NCS 20 0.44% PYKS 17 0.38% COR 16 0.35% BR6OX1/CYP85A1 16 0.35% MVD 16 0.35% DFR 15 0.33% CPD/CYP90A1 15 0.33% ROT3/CYP90C1 14 0.31% TYDC_DDC 13 0.29% DET2 13 0.29% 7DLH 12 0.27% CYP719 10 0.22% CYP80B1 10 0.22% SQS/FDFT1 10 0.22% AACT 10 0.22% ISY 8 0.18% BBE 8 0.18% CCoAOMT 7 0.15% SQE 7 0.15% FLS 6 0.13% CPR 6 0.13% DXS 6 0.13% CHS 5 0.11% SMO1/SMO2 5 0.11% MVK 5 0.11% GGPPS 5 0.11% TDC 4 0.09% MPO 4 0.09% CHI 4 0.09% FPPS 4 0.09% XMT_MXMT_DXMT 3 0.07% HPPR 3 0.07% DWF5 3 0.07% HMGR 3 0.07% CYP80F1 2 0.04% DWF1 2 0.04% PMK 2 0.04% MDS/IspF 2 0.04% HDR/IspH 2 0.04% HMGS 2 0.04% ADC 1 0.02% 6OMT_4OMT_SOMT 1 0.02% HYD1 1 0.02% DWF7 1 0.02% CPI1 1 0.02% CMK/IspE 1 0.02% HDS/IspG 1 0.02% MCT/IspD 1 0.02% DXR 1 0.02% GPPS 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 438 20 BAHD (164) View species results
Phenylpropanoid pathway 399 11 POD (158) View species results
Alkaloid pathway 360 22 7DLGT (69) View species results
Flavonoid pathway 178 12 UFGT (102) View species results
Rosmarinic acid pathway 166 7 C4H (75) View species results
Steroid pathway 111 12 CAS (65) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 339 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status
buxus_sinica_BUSI_002061-RA Alkaloid TYDC_DDC low borderline
buxus_sinica_BUSI_002063-RA Alkaloid TYDC_DDC low borderline
buxus_sinica_BUSI_006626-RA Alkaloid TYDC_DDC low borderline
buxus_sinica_BUSI_008324-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_008329-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_008345-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_009192-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_009193-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_012718-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_019881-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_019889-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_021564-RA Alkaloid TYDC_DDC medium borderline
buxus_sinica_BUSI_022840-RA Alkaloid TYDC_DDC low borderline