Calotropis gigantea (calotropis_gigantea)
Imported from atlas release summary for Calotropis gigantea.
1206
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1206
Candidate Genes
C4H
5.87%
C3'H/CYP98A
5.71%
BAHD
5.68%
IFS
4.17%
UGT
4.17%
UFGT
3.97%
7DLGT
3.91%
4CL
3.84%
Other Families
62.68%
More Families (95)
CYP76
108
3.54%
T3O
104
3.41%
F3H
103
3.38%
POD
97
3.18%
NMT
75
2.46%
DWF4/CYP90B1
67
2.2%
H6H
65
2.13%
BR6OX2/CYP85A2
62
2.03%
STR
55
1.81%
CYP71
50
1.64%
TRI/TRII
49
1.61%
CODM/T6ODM
47
1.54%
F3'H/CYP75B
47
1.54%
CAD
46
1.51%
CAS
37
1.21%
CSE
36
1.18%
SMT1/SMT2/SMT3
34
1.12%
TPS
34
1.12%
GES
32
1.05%
LAC
30
0.98%
HCT
30
0.98%
IFR
28
0.92%
TAT
28
0.92%
GS
27
0.89%
FNS
26
0.85%
SGD
24
0.79%
RAS
24
0.79%
IO
23
0.75%
7DLH
23
0.75%
CYP90D1
23
0.75%
PYKS
22
0.72%
SLS
19
0.62%
ANR
19
0.62%
T16H
18
0.59%
NCS
17
0.56%
PMT
17
0.56%
COMT
17
0.56%
CCR
17
0.56%
G8O/G8H
16
0.53%
F3'5'H/CYP75A
16
0.53%
F5H/CYP84A
16
0.53%
BBE
15
0.49%
CPD/CYP90A1
14
0.46%
CNMT
13
0.43%
COR
12
0.39%
16OMT
12
0.39%
PAL
12
0.39%
DFR
12
0.39%
BR6OX1/CYP85A1
12
0.39%
LAMT
10
0.33%
8HGO
10
0.33%
CYP51G1
10
0.33%
FPPS
10
0.33%
MPO
9
0.3%
DET2
9
0.3%
DXS
8
0.26%
GGPPS
8
0.26%
CYP80B1
7
0.23%
CYP719
7
0.23%
ANS/LDOX
7
0.23%
CCoAOMT
7
0.23%
AACT
6
0.2%
CPR
5
0.16%
SQS/FDFT1
5
0.16%
SQE
5
0.16%
ROT3/CYP90C1
4
0.13%
MVD
4
0.13%
ISY
3
0.1%
ADC
3
0.1%
CHI
3
0.1%
HPPR
3
0.1%
HYD1
3
0.1%
MVK
3
0.1%
TYDC_DDC
2
0.07%
TDC
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
FLS
2
0.07%
CHS
2
0.07%
SMO1/SMO2
2
0.07%
HMGR
2
0.07%
PMK
2
0.07%
CMK/IspE
2
0.07%
CYP80F1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
CPI1
1
0.03%
DWF7
1
0.03%
DXR
1
0.03%
MCT/IspD
1
0.03%
IDI
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 367 | 19 | BAHD (136) | View species results |
| Alkaloid pathway | 280 | 22 | 7DLGT (45) | View species results |
| Phenylpropanoid pathway | 228 | 11 | POD (90) | View species results |
| Flavonoid pathway | 165 | 11 | UFGT (110) | View species results |
| Rosmarinic acid pathway | 104 | 7 | C4H (37) | View species results |
| Steroid pathway | 62 | 12 | CAS (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1127 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 227 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cgigscaffold_1830068970 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_190072050 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_20075530 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_20075540 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_20075550 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_20075560 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_20075570 | Alkaloid | 7DLGT | high | pass |
| Cgigscaffold_20075580 | Alkaloid | 7DLGT | high | pass |
| Cgigscaffold_20075590 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_20075600 | Alkaloid | 7DLGT | high | pass |
| Cgigscaffold_20077010 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_20077020 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_20077030 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_20077040 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_220089520 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_220089530 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_220089540 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_220089550 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_230093980 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_230095650 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_230095660 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_2330096080 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_2330096090 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_240096950 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_2580101210 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_270105950 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_280108590 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_300119320 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_30111330 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_30113810 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_30117420 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_310121810 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_310121820 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_310121830 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_310121840 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_320123970 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_3530129150 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_370131730 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_380132750 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_380133740 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_40136350 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_40138920 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_40138930 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_440143430 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_440143440 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_490149230 | Alkaloid | 7DLGT | medium | pass |
| Cgigscaffold_490149240 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_490149250 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_490149260 | Alkaloid | 7DLGT | low | borderline |
| Cgigscaffold_490149290 | Alkaloid | 7DLGT | low | borderline |