Capsicum annuum (capsicum_annuum)
Imported from atlas release summary for Capsicum annuum.
2294
Candidate Protein Records
1585
Pathway-Level Records
5014
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5014
Family-Level Calls
C4H
8.3%
C3'H/CYP98A
7.5%
CYP76
4.71%
T3O
4.47%
IFS
4.17%
4CL
3.71%
BAHD
3.37%
F3'H/CYP75B
3.33%
Other Families
60.45%
More Families (96)
F3H
160
3.19%
POD
159
3.17%
DWF4/CYP90B1
145
2.89%
BR6OX2/CYP85A2
128
2.55%
NMT
104
2.07%
H6H
99
1.97%
CYP71
96
1.91%
TPS
96
1.91%
CODM/T6ODM
94
1.87%
STR
89
1.78%
GES
80
1.6%
UGT
79
1.58%
CAD
70
1.4%
SMT1/SMT2/SMT3
68
1.36%
COMT
60
1.2%
BBE
56
1.12%
IO
56
1.12%
T16H
55
1.1%
TRI/TRII
54
1.08%
G8O/G8H
51
1.02%
F5H/CYP84A
50
1.0%
CYP90D1
50
1.0%
7DLH
47
0.94%
F3'5'H/CYP75A
45
0.9%
CSE
45
0.9%
LAC
45
0.9%
CAS
45
0.9%
16OMT
43
0.86%
PYKS
37
0.74%
FNS
37
0.74%
SLS
35
0.7%
LAMT
33
0.66%
7DLGT
31
0.62%
GS
31
0.62%
SGD
31
0.62%
IFR
30
0.6%
CYP51G1
30
0.6%
BR6OX1/CYP85A1
30
0.6%
PAL
27
0.54%
CPD/CYP90A1
26
0.52%
UFGT
22
0.44%
TAT
22
0.44%
CCR
20
0.4%
NCS
19
0.38%
CNMT
19
0.38%
ANR
19
0.38%
8HGO
17
0.34%
CYP80B1
14
0.28%
DFR
14
0.28%
ANS/LDOX
14
0.28%
CHS
14
0.28%
FPPS
14
0.28%
TYDC_DDC
13
0.26%
ROT3/CYP90C1
13
0.26%
6OMT_4OMT_SOMT
12
0.24%
HPPR
12
0.24%
HMGR
12
0.24%
AACT
12
0.24%
MPO
11
0.22%
CCoAOMT
11
0.22%
COR
10
0.2%
PMT
10
0.2%
GGPPS
10
0.2%
FLS
9
0.18%
RAS
9
0.18%
CPR
9
0.18%
SQS/FDFT1
8
0.16%
HMGS
8
0.16%
ISY
7
0.14%
CYP719
7
0.14%
SQE
7
0.14%
XMT_MXMT_DXMT
6
0.12%
SMO1/SMO2
6
0.12%
DET2
6
0.12%
CHI
5
0.1%
HDS/IspG
5
0.1%
HDR/IspH
5
0.1%
ODC
4
0.08%
TDC
4
0.08%
DXS
4
0.08%
MVK
4
0.08%
MVD
4
0.08%
ADC
3
0.06%
HCT
3
0.06%
DWF1
3
0.06%
HYD1
3
0.06%
PMK
3
0.06%
CMK/IspE
3
0.06%
IDI
3
0.06%
MCT/IspD
3
0.06%
DWF5
2
0.04%
DWF7
2
0.04%
CPI1
2
0.04%
FK
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 436 | 19 | BAHD (130) | View species results |
| Phenylpropanoid pathway | 377 | 12 | POD (148) | View species results |
| Alkaloid pathway | 368 | 27 | GES (74) | View species results |
| Rosmarinic acid pathway | 191 | 7 | C4H (102) | View species results |
| Steroid pathway | 108 | 13 | SMT1/SMT2/SMT3 (47) | View species results |
| Flavonoid pathway | 105 | 12 | 4CL (42) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2506 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 181 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CannPGAv.1.6.scaffold10810002740.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| CannPGAv.1.6.scaffold11900005670.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold13980011760.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold14020011860.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold19050020660.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold26060025380.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold3220027530.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| CannPGAv.1.6.scaffold3220027540.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| CannPGAv.1.6.scaffold5230033000.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| CannPGAv.1.6.scaffold5880034320.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cann01G0007170.1 | Steroid | SQE | low | borderline |
| Cann02G0004710.1 | Steroid | SQE | medium | pass |
| Cann04G0018780.1 | Steroid | SQE | medium | pass |
| Cann06G0013420.1 | Steroid | SQE | low | borderline |
| Cann12G0018290.1 | Steroid | SQE | medium | pass |
| Cann12G0018300.1 | Steroid | SQE | medium | pass |
| CannPGAv.1.6.scaffold5040031220.1 | Steroid | SQE | medium | pass |
| Cann01G0014000.1 | Steroid | SQS/FDFT1 | high | pass |
| Cann01G0016780.1 | Steroid | SQS/FDFT1 | low | borderline |
| Cann01G0039840.1 | Steroid | SQS/FDFT1 | low | borderline |
| Cann02G0018940.1 | Steroid | SQS/FDFT1 | medium | pass |
| Cann02G0022830.1 | Steroid | SQS/FDFT1 | low | borderline |
| Cann04G0003280.1 | Steroid | SQS/FDFT1 | medium | pass |
| Cann10G0020130.1 | Steroid | SQS/FDFT1 | high | pass |
| Cann12G0021860.1 | Steroid | SQS/FDFT1 | low | borderline |