Capsicum baccatum (capsicum_baccatum)
Imported from atlas release summary for Capsicum baccatum.
2147
Candidate Protein Records
1446
Pathway-Level Records
4884
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4884
Family-Level Calls
C4H
8.97%
C3'H/CYP98A
7.88%
CYP76
5.14%
IFS
4.79%
T3O
4.63%
4CL
3.38%
POD
3.19%
F3H
3.13%
Other Families
58.89%
More Families (97)
BAHD
149
3.05%
DWF4/CYP90B1
145
2.97%
F3'H/CYP75B
142
2.91%
BR6OX2/CYP85A2
132
2.7%
NMT
98
2.01%
CYP71
97
1.99%
H6H
85
1.74%
STR
84
1.72%
TPS
80
1.64%
CODM/T6ODM
74
1.52%
GES
73
1.49%
COMT
70
1.43%
CAD
68
1.39%
IO
61
1.25%
T16H
57
1.17%
CAS
56
1.15%
G8O/G8H
55
1.13%
BBE
54
1.11%
SMT1/SMT2/SMT3
53
1.09%
UGT
51
1.04%
F3'5'H/CYP75A
50
1.02%
TRI/TRII
48
0.98%
16OMT
47
0.96%
CSE
47
0.96%
CYP90D1
47
0.96%
F5H/CYP84A
45
0.92%
SLS
40
0.82%
LAC
38
0.78%
CYP51G1
37
0.76%
7DLH
36
0.74%
PYKS
35
0.72%
FNS
35
0.72%
PAL
33
0.68%
BR6OX1/CYP85A1
33
0.68%
GS
31
0.63%
7DLGT
30
0.61%
IFR
30
0.61%
LAMT
27
0.55%
TAT
26
0.53%
NCS
25
0.51%
CPD/CYP90A1
24
0.49%
SGD
23
0.47%
CCR
20
0.41%
UFGT
18
0.37%
ANR
18
0.37%
8HGO
17
0.35%
CNMT
15
0.31%
6OMT_4OMT_SOMT
15
0.31%
DFR
15
0.31%
CHS
15
0.31%
HPPR
14
0.29%
ANS/LDOX
12
0.25%
CCoAOMT
12
0.25%
ROT3/CYP90C1
12
0.25%
AACT
12
0.25%
FPPS
12
0.25%
MPO
11
0.23%
COR
10
0.2%
TYDC_DDC
10
0.2%
GGPPS
10
0.2%
CYP80B1
9
0.18%
ISY
9
0.18%
CPR
9
0.18%
HMGR
9
0.18%
PMT
8
0.16%
RAS
8
0.16%
SQS/FDFT1
8
0.16%
XMT_MXMT_DXMT
7
0.14%
SQE
7
0.14%
SMO1/SMO2
6
0.12%
DET2
6
0.12%
CYP719
5
0.1%
HDR/IspH
5
0.1%
HMGS
5
0.1%
ODC
4
0.08%
FLS
4
0.08%
HCT
4
0.08%
MVD
4
0.08%
CHI
3
0.06%
DWF1
3
0.06%
MVK
3
0.06%
DXS
3
0.06%
HDS/IspG
3
0.06%
IDI
3
0.06%
CMK/IspE
3
0.06%
CYP80F1
2
0.04%
TDC
2
0.04%
DWF5
2
0.04%
DWF7
2
0.04%
HYD1
2
0.04%
MDS/IspF
2
0.04%
PMK
2
0.04%
ADC
1
0.02%
FK
1
0.02%
DXR
1
0.02%
MCT/IspD
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 378 | 19 | BAHD (110) | View species results |
| Phenylpropanoid pathway | 367 | 12 | POD (140) | View species results |
| Alkaloid pathway | 327 | 26 | GES (65) | View species results |
| Rosmarinic acid pathway | 182 | 7 | C4H (96) | View species results |
| Flavonoid pathway | 98 | 12 | 4CL (39) | View species results |
| Steroid pathway | 94 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2563 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 161 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CbacCBv1.2.scaffold9100342500.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CbacCBv1.2.scaffold9100342510.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CbacCBv1.2.scaffold9150343490.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CbacCBv1.2.scaffold9150343500.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CbacCBv1.2.scaffold9150343510.1 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CbacCBv1.2.scaffold9150343540.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CbacCBv1.2.scaffold9410347760.1 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| CbacCBv1.2.scaffold9500349670.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| CbacCBv1.2.scaffold9500349680.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CbacCBv1.2.scaffold950348790.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| CbacCBv1.2.scaffold950348800.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CbacCBv1.2.scaffold9590350690.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CbacCBv1.2.scaffold19620132050.1 | Terpenoid | DXR | high | pass | DXR__00001__sp_Q9XFS9_DXR_ARATH |
| CbacCBv1.2.scaffold11900033430.1 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |
| CbacCBv1.2.scaffold1450074790.1 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |
| CbacCBv1.2.scaffold15950095350.1 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |
| CbacCBv1.2.scaffold1180032190.1 | Terpenoid | FPPS | low | borderline | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold11840032840.1 | Terpenoid | FPPS | medium | pass | FPPS__00008__sp_Q4JHN6_FPS_PANGI |
| CbacCBv1.2.scaffold15580091760.1 | Terpenoid | FPPS | medium | pass | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold1780116850.1 | Terpenoid | FPPS | low | borderline | FPPS__00005__sp_P34802_GGPP1_ARATH |
| CbacCBv1.2.scaffold20020136710.1 | Terpenoid | FPPS | medium | pass | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold23710161450.1 | Terpenoid | FPPS | medium | pass | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold23710161460.1 | Terpenoid | FPPS | medium | pass | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold2560173050.1 | Terpenoid | FPPS | medium | borderline | FPPS__00005__sp_P34802_GGPP1_ARATH |
| CbacCBv1.2.scaffold370215490.1 | Terpenoid | FPPS | medium | pass | FPPS__00002__sp_K7W9N9_CPT6_SOLLC |
| CbacCBv1.2.scaffold4290235940.1 | Terpenoid | FPPS | low | borderline | FPPS__00007__sp_P80042_GGPPS_CAPAN |
| CbacCBv1.2.scaffold4610243490.1 | Terpenoid | FPPS | medium | pass | FPPS__00001__sp_B8XA40_ZFPS_SOLHA |
| CbacCBv1.2.scaffold8020322760.1 | Terpenoid | FPPS | medium | pass | FPPS__00008__sp_Q4JHN6_FPS_PANGI |
| CbacCBv1.2.scaffold11900033630.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold13990066710.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold17510113550.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00001__sp_Q8S948_SPS1_ARATH |
| CbacCBv1.2.scaffold20050137180.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold20880144900.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold6540289570.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold6760296830.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold6760296840.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold6760296850.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH |
| CbacCBv1.2.scaffold8690335120.1 | Terpenoid | GGPPS | medium | borderline | GGPPS__00001__sp_Q8S948_SPS1_ARATH |
| CbacCBv1.2.scaffold5510263680.1 | Terpenoid | GPPS | medium | borderline | GPPS__00001__sp_Q5HZ00_SPS3_ARATH |
| CbacCBv1.2.scaffold1190033370.1 | Terpenoid | HDR/IspH | low | borderline | HDR_IspH__00001__sp_Q94B35_ISPH_ARATH |
| CbacCBv1.2.scaffold12420042730.1 | Terpenoid | HDR/IspH | high | pass | HDR_IspH__00001__sp_Q94B35_ISPH_ARATH |
| CbacCBv1.2.scaffold4180232130.1 | Terpenoid | HDR/IspH | low | borderline | HDR_IspH__00001__sp_Q94B35_ISPH_ARATH |
| CbacCBv1.2.scaffold8030323150.1 | Terpenoid | HDR/IspH | high | pass | HDR_IspH__00001__sp_Q94B35_ISPH_ARATH |
| CbacCBv1.2.scaffold8610334170.1 | Terpenoid | HDR/IspH | medium | pass | HDR_IspH__00001__sp_Q94B35_ISPH_ARATH |
| CbacCBv1.2.scaffold1680105060.1 | Terpenoid | HDS/IspG | low | borderline | HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH |
| CbacCBv1.2.scaffold2470168510.1 | Terpenoid | HDS/IspG | low | borderline | HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH |
| CbacCBv1.2.scaffold3520208020.1 | Terpenoid | HDS/IspG | high | pass | HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH |
| CbacCBv1.2.scaffold10540009810.1 | Terpenoid | HMGR | medium | pass | HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI |
| CbacCBv1.2.scaffold12010035610.1 | Terpenoid | HMGR | medium | pass | HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI |
| CbacCBv1.2.scaffold1610097630.1 | Terpenoid | HMGR | low | borderline | HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI |