Cardamine hirsuta (cardamine_hirsuta)
Imported from atlas release summary for Cardamine hirsuta.
1757
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1757
Candidate Genes
BAHD
6.96%
C4H
6.07%
C3'H/CYP98A
5.81%
IFS
4.15%
CYP76
3.72%
UGT
3.6%
4CL
3.53%
POD
3.48%
Other Families
62.68%
More Families (95)
NMT
140
3.36%
T3O
135
3.24%
UFGT
134
3.22%
7DLGT
132
3.17%
F3H
114
2.74%
BR6OX2/CYP85A2
94
2.26%
DWF4/CYP90B1
93
2.23%
SMT1/SMT2/SMT3
78
1.87%
SGD
71
1.7%
CODM/T6ODM
69
1.66%
STR
66
1.58%
CAS
64
1.54%
CYP71
60
1.44%
TRI/TRII
57
1.37%
TPS
57
1.37%
H6H
56
1.34%
F3'H/CYP75B
55
1.32%
GES
52
1.25%
CSE
49
1.18%
CAD
47
1.13%
T16H
41
0.98%
IFR
38
0.91%
FNS
38
0.91%
F5H/CYP84A
35
0.84%
G8O/G8H
34
0.82%
BBE
31
0.74%
SLS
30
0.72%
PYKS
29
0.7%
COMT
29
0.7%
CYP90D1
28
0.67%
LAC
27
0.65%
ANR
25
0.6%
RAS
25
0.6%
7DLH
24
0.58%
F3'5'H/CYP75A
23
0.55%
TAT
23
0.55%
BR6OX1/CYP85A1
23
0.55%
HCT
22
0.53%
CCR
22
0.53%
IO
20
0.48%
GS
20
0.48%
NCS
19
0.46%
LAMT
19
0.46%
CPD/CYP90A1
19
0.46%
GGPPS
19
0.46%
16OMT
18
0.43%
8HGO
17
0.41%
DFR
16
0.38%
SQE
16
0.38%
ANS/LDOX
15
0.36%
CPR
15
0.36%
CNMT
14
0.34%
ROT3/CYP90C1
14
0.34%
COR
13
0.31%
CYP51G1
13
0.31%
PMT
11
0.26%
FPPS
11
0.26%
MPO
10
0.24%
AACT
10
0.24%
PAL
9
0.22%
CCoAOMT
8
0.19%
HPPR
8
0.19%
SMO1/SMO2
8
0.19%
CHI
7
0.17%
DWF7
7
0.17%
MVK
7
0.17%
CYP80B1
6
0.14%
PMK
6
0.14%
SQS/FDFT1
5
0.12%
DET2
5
0.12%
MVD
5
0.12%
DXS
5
0.12%
TDC
4
0.1%
CYP719
4
0.1%
CHS
4
0.1%
DWF1
4
0.1%
CYP80F1
3
0.07%
MCT/IspD
3
0.07%
ADC
2
0.05%
TYDC_DDC
2
0.05%
ISY
2
0.05%
FLS
2
0.05%
HYD1
2
0.05%
HMGR
2
0.05%
IDI
2
0.05%
CMK/IspE
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
MDS/IspF
1
0.02%
HDR/IspH
1
0.02%
HMGS
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 556 | 20 | BAHD (247) | View species results |
| Alkaloid pathway | 416 | 19 | NMT (83) | View species results |
| Phenylpropanoid pathway | 320 | 11 | POD (141) | View species results |
| Flavonoid pathway | 190 | 10 | UFGT (125) | View species results |
| Steroid pathway | 143 | 11 | SMT1/SMT2/SMT3 (56) | View species results |
| Rosmarinic acid pathway | 132 | 7 | C4H (54) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1577 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 337 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Chir03G0020810.8 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0020810.9 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0020820.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0020830.1 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Chir03G0020830.2 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0020840.1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir03G0020850.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0021980.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0021990.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0022380.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0025330.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Chir03G0026680.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir03G0028480.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir04G0001840.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir04G0002600.1 | Terpenoid | CYP76 | medium | pass | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Chir04G0003220.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Chir04G0007530.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir04G0007540.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir04G0010290.1 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Chir04G0010790.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Chir04G0012220.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Chir04G0016860.1 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Chir04G0024280.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir04G0025570.1 | Terpenoid | CYP76 | medium | pass | CYP76__00005__sp_A0A125QZE2_C76K1_SALMI |
| Chir04G0029010.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir04G0029020.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Chir04G0029030.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Chir04G0029040.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir04G0029050.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Chir04G0029060.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir04G0029070.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| Chir04G0029080.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| Chir04G0030270.1 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Chir05G0003590.1 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Chir05G0003650.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Chir05G0003660.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Chir05G0003670.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Chir05G0003720.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir05G0008170.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Chir05G0008180.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Chir05G0009430.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir05G0013530.1 | Terpenoid | CYP76 | low | borderline | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Chir05G0013540.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Chir05G0019320.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Chir05G0027780.1 | Terpenoid | CYP76 | medium | pass | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Chir05G0027780.2 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Chir05G0027790.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Chir05G0027800.1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Chir05G0028680.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Chir06G0004800.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |