Carnegiea gigantea (carnegiea_gigantea)
/
Imported from atlas release summary for Carnegiea gigantea.
1321
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1321
Candidate Genes
C3'H/CYP98A
6.66%
C4H
6.5%
BAHD
4.77%
CYP76
3.95%
POD
3.76%
T3O
3.73%
4CL
3.73%
IFS
3.56%
Other Families
63.34%
More Families (97)
UGT
108
3.05%
NMT
100
2.82%
7DLGT
97
2.74%
UFGT
96
2.71%
F3'H/CYP75B
90
2.54%
BR6OX2/CYP85A2
83
2.34%
F3H
79
2.23%
DWF4/CYP90B1
69
1.95%
CODM/T6ODM
64
1.81%
CYP71
64
1.81%
TRI/TRII
56
1.58%
COMT
54
1.52%
TPS
52
1.47%
CAD
48
1.36%
CAS
48
1.36%
STR
46
1.3%
G8O/G8H
45
1.27%
PYKS
41
1.16%
SMT1/SMT2/SMT3
38
1.07%
H6H
37
1.04%
T16H
37
1.04%
GES
36
1.02%
IFR
36
1.02%
F3'5'H/CYP75A
35
0.99%
CYP90D1
33
0.93%
LAC
29
0.82%
7DLH
28
0.79%
HCT
28
0.79%
CSE
28
0.79%
IO
27
0.76%
CYP51G1
27
0.76%
BBE
26
0.73%
PMT
24
0.68%
SGD
22
0.62%
FNS
22
0.62%
RAS
22
0.62%
BR6OX1/CYP85A1
22
0.62%
GS
21
0.59%
SLS
20
0.56%
FPPS
19
0.54%
16OMT
18
0.51%
ANS/LDOX
18
0.51%
CNMT
16
0.45%
ANR
16
0.45%
F5H/CYP84A
16
0.45%
CPD/CYP90A1
16
0.45%
CCR
15
0.42%
TAT
15
0.42%
CHS
13
0.37%
8HGO
12
0.34%
CPR
12
0.34%
DFR
11
0.31%
CCoAOMT
10
0.28%
CYP719
9
0.25%
COR
9
0.25%
NCS
9
0.25%
PAL
9
0.25%
LAMT
8
0.23%
FLS
8
0.23%
CYP80B1
7
0.2%
XMT_MXMT_DXMT
7
0.2%
HPPR
7
0.2%
SQE
7
0.2%
AACT
7
0.2%
HMGR
7
0.2%
SQS/FDFT1
6
0.17%
ROT3/CYP90C1
6
0.17%
TDC
5
0.14%
MPO
5
0.14%
ISY
5
0.14%
DWF7
5
0.14%
SMO1/SMO2
5
0.14%
GGPPS
5
0.14%
MVD
5
0.14%
TYDC_DDC
4
0.11%
6OMT_4OMT_SOMT
4
0.11%
HDR/IspH
4
0.11%
MVK
4
0.11%
DXR
4
0.11%
MDS/IspF
4
0.11%
HYD1
3
0.08%
DET2
3
0.08%
HMGS
3
0.08%
IDI
3
0.08%
DXS
3
0.08%
MCT/IspD
3
0.08%
CHI
2
0.06%
DWF1
2
0.06%
CMK/IspE
2
0.06%
HDS/IspG
2
0.06%
ADC
1
0.03%
CYP80F1
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
PMK
1
0.03%
GPPS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 387 | 19 | BAHD (134) | View species results |
| Phenylpropanoid pathway | 293 | 11 | POD (120) | View species results |
| Alkaloid pathway | 276 | 19 | NMT (47) | View species results |
| Flavonoid pathway | 152 | 12 | UFGT (82) | View species results |
| Rosmarinic acid pathway | 124 | 7 | C4H (56) | View species results |
| Steroid pathway | 89 | 13 | CAS (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1499 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 219 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cgig1_13819 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Cgig1_14065 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_14214 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Cgig1_14391 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Cgig1_14528 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Cgig1_14878 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Cgig1_15463 | Alkaloid | NMT | low | borderline | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Cgig1_15975 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_16468 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| Cgig1_16646 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Cgig1_17775 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_18103 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Cgig1_18144 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_18188 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cgig1_18209 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Cgig1_18420 | Alkaloid | NMT | low | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_18764 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Cgig1_19128 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_19130 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Cgig1_19450 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Cgig1_19695 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Cgig1_20716 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Cgig1_20765 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Cgig1_21939 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Cgig1_22218 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Cgig1_22557 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_22558 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_23629 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_23630 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_23661 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Cgig1_23662 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Cgig1_24549 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cgig1_25172 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Cgig1_25362 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Cgig1_25774 | Alkaloid | NMT | medium | pass | NMT__00062__sp_Q9SCP7_NAMT1_ARATH |
| Cgig1_25792 | Alkaloid | NMT | low | borderline | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Cgig1_26044 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_26459 | Alkaloid | NMT | medium | pass | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Cgig1_26465 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Cgig1_26538 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_26898 | Alkaloid | NMT | low | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Cgig1_26904 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Cgig1_27061 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_27062 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_27238 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Cgig1_27360 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Cgig1_27452 | Alkaloid | NMT | medium | pass | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Cgig1_27936 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Cgig1_28135 | Alkaloid | NMT | medium | borderline | NMT__00001__sp_A0A075D654_ANMT_RAUSE |
| Cgig1_28275 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |