Carya cathayensis (carya_cathayensis)
Imported from atlas release summary for Carya cathayensis.
1758
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1758
Candidate Genes
C4H
5.8%
C3'H/CYP98A
5.63%
BAHD
5.42%
CYP76
4.07%
POD
4.0%
IFS
3.88%
UGT
3.62%
4CL
3.41%
Other Families
64.17%
More Families (96)
T3O
128
3.03%
F3H
125
2.96%
7DLGT
118
2.79%
UFGT
117
2.77%
CAD
91
2.15%
DWF4/CYP90B1
89
2.11%
TPS
84
1.99%
NMT
83
1.96%
F3'H/CYP75B
82
1.94%
CAS
81
1.92%
CODM/T6ODM
78
1.85%
BR6OX2/CYP85A2
74
1.75%
GES
71
1.68%
STR
63
1.49%
SMT1/SMT2/SMT3
59
1.4%
H6H
57
1.35%
GS
54
1.28%
CYP90D1
52
1.23%
TRI/TRII
49
1.16%
LAC
49
1.16%
CYP71
47
1.11%
T16H
45
1.06%
IFR
45
1.06%
HCT
45
1.06%
PYKS
41
0.97%
CSE
39
0.92%
IO
38
0.9%
COMT
35
0.83%
BBE
31
0.73%
G8O/G8H
30
0.71%
RAS
30
0.71%
NCS
29
0.69%
TAT
27
0.64%
F5H/CYP84A
26
0.62%
LAMT
25
0.59%
PMT
25
0.59%
FNS
25
0.59%
SLS
24
0.57%
COR
23
0.54%
7DLH
21
0.5%
SGD
21
0.5%
F3'5'H/CYP75A
21
0.5%
PAL
21
0.5%
BR6OX1/CYP85A1
21
0.5%
CNMT
20
0.47%
16OMT
19
0.45%
DFR
19
0.45%
ANR
17
0.4%
ANS/LDOX
17
0.4%
CCR
17
0.4%
8HGO
16
0.38%
CHS
13
0.31%
CPD/CYP90A1
13
0.31%
CYP80B1
11
0.26%
ROT3/CYP90C1
11
0.26%
ISY
10
0.24%
FPPS
10
0.24%
MPO
9
0.21%
CPR
9
0.21%
SQS/FDFT1
9
0.21%
SQE
9
0.21%
GGPPS
9
0.21%
CYP719
8
0.19%
TYDC_DDC
7
0.17%
CCoAOMT
7
0.17%
HPPR
7
0.17%
MVK
7
0.17%
AACT
7
0.17%
DXS
7
0.17%
MVD
6
0.14%
TDC
5
0.12%
CHI
5
0.12%
CYP51G1
5
0.12%
SMO1/SMO2
5
0.12%
DET2
5
0.12%
HMGR
5
0.12%
XMT_MXMT_DXMT
4
0.09%
PMK
4
0.09%
HMGS
4
0.09%
6OMT_4OMT_SOMT
3
0.07%
CYP80F1
3
0.07%
DWF1
3
0.07%
CPI1
3
0.07%
DWF5
3
0.07%
MCT/IspD
3
0.07%
ADC
2
0.05%
ODC
2
0.05%
DWF7
2
0.05%
HDR/IspH
2
0.05%
IDI
2
0.05%
MDS/IspF
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
HYD1
1
0.02%
FK
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 526 | 19 | BAHD (180) | View species results |
| Alkaloid pathway | 386 | 26 | GES (65) | View species results |
| Phenylpropanoid pathway | 386 | 12 | POD (157) | View species results |
| Flavonoid pathway | 198 | 9 | UFGT (111) | View species results |
| Rosmarinic acid pathway | 134 | 7 | C4H (46) | View species results |
| Steroid pathway | 128 | 11 | CAS (67) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1568 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 304 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ccatscaffold149020015240 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold153340024150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold166430047700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold166430049210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold174010057010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold174010057020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold174010058130 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold176190060620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold181640067420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold181640067900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold181640067910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold181640067930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold182700070090 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold185980072800 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold185980072810 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold192490076700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold195780079330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold195780079780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold200110085250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold200110085270 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold208820094530 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold230670109750 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold237210116950 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold237210116960 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold244830122390 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Ccatscaffold247020124240 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold255700130920 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold264420140120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold271960148010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold283960157270 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold285030157370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold287230159830 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold298080168370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold314440179100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold328630191140 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold328630191150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold328630191160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold330840192810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold351450206450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold363510212050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold367880214210 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold372180216160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold380900219820 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold380900219830 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold386340223080 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold411340233340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold437420245380 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold455900252150 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccatscaffold464510255310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccatscaffold482960260200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |