PlantSME Plant secondary metabolism enzyme database

Carya cathayensis (carya_cathayensis)

Imported from atlas release summary for Carya cathayensis.

1758
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 526 19 BAHD (180) View species results
Alkaloid pathway 386 26 GES (65) View species results
Phenylpropanoid pathway 386 12 POD (157) View species results
Flavonoid pathway 198 9 UFGT (111) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 128 11 CAS (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1568 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 304 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Ccatscaffold154430026570 Alkaloid T16H medium borderline
Ccatscaffold154430026860 Alkaloid T16H low borderline
Ccatscaffold157720033840 Alkaloid T16H medium borderline
Ccatscaffold157720033880 Alkaloid T16H medium borderline
Ccatscaffold165340045700 Alkaloid T16H low borderline
Ccatscaffold166430049780 Alkaloid T16H low borderline
Ccatscaffold167510051070 Alkaloid T16H medium borderline
Ccatscaffold169670051840 Alkaloid T16H medium borderline
Ccatscaffold175100059050 Alkaloid T16H medium borderline
Ccatscaffold178370063510 Alkaloid T16H medium borderline
Ccatscaffold197950082140 Alkaloid T16H medium borderline
Ccatscaffold206670093190 Alkaloid T16H low borderline
Ccatscaffold206670093210 Alkaloid T16H low borderline
Ccatscaffold227370107580 Alkaloid T16H medium borderline
Ccatscaffold231780111460 Alkaloid T16H medium borderline
Ccatscaffold241580120600 Alkaloid T16H medium borderline
Ccatscaffold241580120610 Alkaloid T16H medium borderline
Ccatscaffold241580120630 Alkaloid T16H medium borderline
Ccatscaffold245920123680 Alkaloid T16H medium borderline
Ccatscaffold266580141980 Alkaloid T16H medium borderline
Ccatscaffold271960147430 Alkaloid T16H low borderline
Ccatscaffold313350178260 Alkaloid T16H low borderline
Ccatscaffold314440178520 Alkaloid T16H medium borderline
Ccatscaffold328630190370 Alkaloid T16H medium borderline
Ccatscaffold358020209250 Alkaloid T16H medium borderline
Ccatscaffold358020209260 Alkaloid T16H medium borderline
Ccatscaffold358020209280 Alkaloid T16H medium borderline
Ccatscaffold358020209290 Alkaloid T16H medium borderline
Ccatscaffold365700212830 Alkaloid T16H medium borderline
Ccatscaffold450470250680 Alkaloid T16H medium borderline
Ccatscaffold450470250820 Alkaloid T16H medium borderline
Ccatscaffold511230268350 Alkaloid T16H medium borderline
Ccatscaffold523240271960 Alkaloid T16H medium borderline
Ccatscaffold523240271980 Alkaloid T16H low borderline
Ccatscaffold523240272000 Alkaloid T16H medium pass
Ccatscaffold523240272020 Alkaloid T16H low borderline
Ccatscaffold523240272030 Alkaloid T16H medium borderline
Ccatscaffold657100299280 Alkaloid T16H medium borderline
Ccatscaffold673220309080 Alkaloid T16H low borderline
Ccatscaffold678450314890 Alkaloid T16H medium borderline
Ccatscaffold687580321300 Alkaloid T16H medium borderline
Ccatscaffold687580321330 Alkaloid T16H medium borderline
Ccatscaffold687580321370 Alkaloid T16H medium borderline
Ccatscaffold687580321380 Alkaloid T16H medium borderline
Ccatscaffold694720325260 Alkaloid T16H medium borderline