Carya cathayensis (carya_cathayensis)
Imported from atlas release summary for Carya cathayensis.
2083
Candidate Protein Records
1758
Pathway-Level Records
4226
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4226
Family-Level Calls
C4H
5.8%
C3'H/CYP98A
5.63%
BAHD
5.42%
CYP76
4.07%
POD
4.0%
IFS
3.88%
UGT
3.62%
4CL
3.41%
Other Families
64.17%
More Families (96)
T3O
128
3.03%
F3H
125
2.96%
7DLGT
118
2.79%
UFGT
117
2.77%
CAD
91
2.15%
DWF4/CYP90B1
89
2.11%
TPS
84
1.99%
NMT
83
1.96%
F3'H/CYP75B
82
1.94%
CAS
81
1.92%
CODM/T6ODM
78
1.85%
BR6OX2/CYP85A2
74
1.75%
GES
71
1.68%
STR
63
1.49%
SMT1/SMT2/SMT3
59
1.4%
H6H
57
1.35%
GS
54
1.28%
CYP90D1
52
1.23%
TRI/TRII
49
1.16%
LAC
49
1.16%
CYP71
47
1.11%
T16H
45
1.06%
IFR
45
1.06%
HCT
45
1.06%
PYKS
41
0.97%
CSE
39
0.92%
IO
38
0.9%
COMT
35
0.83%
BBE
31
0.73%
G8O/G8H
30
0.71%
RAS
30
0.71%
NCS
29
0.69%
TAT
27
0.64%
F5H/CYP84A
26
0.62%
LAMT
25
0.59%
PMT
25
0.59%
FNS
25
0.59%
SLS
24
0.57%
COR
23
0.54%
7DLH
21
0.5%
SGD
21
0.5%
F3'5'H/CYP75A
21
0.5%
PAL
21
0.5%
BR6OX1/CYP85A1
21
0.5%
CNMT
20
0.47%
16OMT
19
0.45%
DFR
19
0.45%
ANR
17
0.4%
ANS/LDOX
17
0.4%
CCR
17
0.4%
8HGO
16
0.38%
CHS
13
0.31%
CPD/CYP90A1
13
0.31%
CYP80B1
11
0.26%
ROT3/CYP90C1
11
0.26%
ISY
10
0.24%
FPPS
10
0.24%
MPO
9
0.21%
CPR
9
0.21%
SQS/FDFT1
9
0.21%
SQE
9
0.21%
GGPPS
9
0.21%
CYP719
8
0.19%
TYDC_DDC
7
0.17%
CCoAOMT
7
0.17%
HPPR
7
0.17%
MVK
7
0.17%
AACT
7
0.17%
DXS
7
0.17%
MVD
6
0.14%
TDC
5
0.12%
CHI
5
0.12%
CYP51G1
5
0.12%
SMO1/SMO2
5
0.12%
DET2
5
0.12%
HMGR
5
0.12%
XMT_MXMT_DXMT
4
0.09%
PMK
4
0.09%
HMGS
4
0.09%
6OMT_4OMT_SOMT
3
0.07%
CYP80F1
3
0.07%
DWF1
3
0.07%
CPI1
3
0.07%
DWF5
3
0.07%
MCT/IspD
3
0.07%
ADC
2
0.05%
ODC
2
0.05%
DWF7
2
0.05%
HDR/IspH
2
0.05%
IDI
2
0.05%
MDS/IspF
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
HYD1
1
0.02%
FK
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 526 | 19 | BAHD (180) | View species results |
| Alkaloid pathway | 386 | 26 | GES (65) | View species results |
| Phenylpropanoid pathway | 386 | 12 | POD (157) | View species results |
| Flavonoid pathway | 198 | 9 | UFGT (111) | View species results |
| Rosmarinic acid pathway | 134 | 7 | C4H (46) | View species results |
| Steroid pathway | 128 | 11 | CAS (67) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1568 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 304 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ccatscaffold156610030680 | Alkaloid | SLS | low | borderline |
| Ccatscaffold156610031980 | Alkaloid | SLS | low | borderline |
| Ccatscaffold156610032870 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold162080040950 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold163160041740 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold163160041750 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold199040082480 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold222970103520 | Alkaloid | SLS | low | borderline |
| Ccatscaffold265490140720 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold282830156490 | Alkaloid | SLS | medium | pass |
| Ccatscaffold302490173040 | Alkaloid | SLS | low | borderline |
| Ccatscaffold314440180220 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold377640218760 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold377640218780 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold426610240000 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold448300249930 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold507960267290 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold528660273940 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold528660273950 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold630540295830 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold650010297540 | Alkaloid | SLS | medium | pass |
| Ccatscaffold8740328130 | Alkaloid | SLS | medium | borderline |
| Ccatscaffold149020015240 | Alkaloid | STR | medium | pass |
| Ccatscaffold153340024150 | Alkaloid | STR | low | borderline |
| Ccatscaffold166430047700 | Alkaloid | STR | low | borderline |
| Ccatscaffold166430049210 | Alkaloid | STR | low | borderline |
| Ccatscaffold174010057010 | Alkaloid | STR | low | borderline |
| Ccatscaffold174010057020 | Alkaloid | STR | low | borderline |
| Ccatscaffold174010058130 | Alkaloid | STR | low | borderline |
| Ccatscaffold176190060620 | Alkaloid | STR | low | borderline |
| Ccatscaffold181640067420 | Alkaloid | STR | low | borderline |
| Ccatscaffold181640067900 | Alkaloid | STR | low | borderline |
| Ccatscaffold181640067910 | Alkaloid | STR | low | borderline |
| Ccatscaffold181640067930 | Alkaloid | STR | low | borderline |
| Ccatscaffold182700070090 | Alkaloid | STR | low | borderline |
| Ccatscaffold185980072800 | Alkaloid | STR | medium | pass |
| Ccatscaffold185980072810 | Alkaloid | STR | medium | pass |
| Ccatscaffold192490076700 | Alkaloid | STR | low | borderline |
| Ccatscaffold195780079330 | Alkaloid | STR | low | borderline |
| Ccatscaffold195780079780 | Alkaloid | STR | low | borderline |
| Ccatscaffold200110085250 | Alkaloid | STR | low | borderline |
| Ccatscaffold200110085270 | Alkaloid | STR | medium | pass |
| Ccatscaffold208820094530 | Alkaloid | STR | low | borderline |
| Ccatscaffold230670109750 | Alkaloid | STR | medium | pass |
| Ccatscaffold237210116950 | Alkaloid | STR | medium | pass |
| Ccatscaffold237210116960 | Alkaloid | STR | medium | pass |
| Ccatscaffold244830122390 | Alkaloid | STR | low | borderline |
| Ccatscaffold247020124240 | Alkaloid | STR | low | borderline |
| Ccatscaffold255700130920 | Alkaloid | STR | low | borderline |
| Ccatscaffold264420140120 | Alkaloid | STR | low | borderline |