PlantSME Plant secondary metabolism enzyme database

Carya cathayensis (carya_cathayensis)

Imported from atlas release summary for Carya cathayensis.

2083
Candidate Protein Records
1758
Pathway-Level Records
4226
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.92% Alkaloid pathway 21.96% Phenylpropanoid pathway 21.96% Flavonoid pathway 11.26% Rosmarinic acid pathway 7.62% Steroid pathway 7.28%
Family Distribution
C4H 5.8% C3'H/CYP98A 5.63% BAHD 5.42% CYP76 4.07% POD 4.0% IFS 3.88% UGT 3.62% 4CL 3.41%
Other Families 64.17%
More Families (96)
T3O 128 3.03% F3H 125 2.96% 7DLGT 118 2.79% UFGT 117 2.77% CAD 91 2.15% DWF4/CYP90B1 89 2.11% TPS 84 1.99% NMT 83 1.96% F3'H/CYP75B 82 1.94% CAS 81 1.92% CODM/T6ODM 78 1.85% BR6OX2/CYP85A2 74 1.75% GES 71 1.68% STR 63 1.49% SMT1/SMT2/SMT3 59 1.4% H6H 57 1.35% GS 54 1.28% CYP90D1 52 1.23% TRI/TRII 49 1.16% LAC 49 1.16% CYP71 47 1.11% T16H 45 1.06% IFR 45 1.06% HCT 45 1.06% PYKS 41 0.97% CSE 39 0.92% IO 38 0.9% COMT 35 0.83% BBE 31 0.73% G8O/G8H 30 0.71% RAS 30 0.71% NCS 29 0.69% TAT 27 0.64% F5H/CYP84A 26 0.62% LAMT 25 0.59% PMT 25 0.59% FNS 25 0.59% SLS 24 0.57% COR 23 0.54% 7DLH 21 0.5% SGD 21 0.5% F3'5'H/CYP75A 21 0.5% PAL 21 0.5% BR6OX1/CYP85A1 21 0.5% CNMT 20 0.47% 16OMT 19 0.45% DFR 19 0.45% ANR 17 0.4% ANS/LDOX 17 0.4% CCR 17 0.4% 8HGO 16 0.38% CHS 13 0.31% CPD/CYP90A1 13 0.31% CYP80B1 11 0.26% ROT3/CYP90C1 11 0.26% ISY 10 0.24% FPPS 10 0.24% MPO 9 0.21% CPR 9 0.21% SQS/FDFT1 9 0.21% SQE 9 0.21% GGPPS 9 0.21% CYP719 8 0.19% TYDC_DDC 7 0.17% CCoAOMT 7 0.17% HPPR 7 0.17% MVK 7 0.17% AACT 7 0.17% DXS 7 0.17% MVD 6 0.14% TDC 5 0.12% CHI 5 0.12% CYP51G1 5 0.12% SMO1/SMO2 5 0.12% DET2 5 0.12% HMGR 5 0.12% XMT_MXMT_DXMT 4 0.09% PMK 4 0.09% HMGS 4 0.09% 6OMT_4OMT_SOMT 3 0.07% CYP80F1 3 0.07% DWF1 3 0.07% CPI1 3 0.07% DWF5 3 0.07% MCT/IspD 3 0.07% ADC 2 0.05% ODC 2 0.05% DWF7 2 0.05% HDR/IspH 2 0.05% IDI 2 0.05% MDS/IspF 2 0.05% HDS/IspG 2 0.05% DXR 2 0.05% HYD1 1 0.02% FK 1 0.02% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 526 19 BAHD (180) View species results
Alkaloid pathway 386 26 GES (65) View species results
Phenylpropanoid pathway 386 12 POD (157) View species results
Flavonoid pathway 198 9 UFGT (111) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 128 11 CAS (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1568 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 304 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Ccatscaffold374570217860 Phenylpropanoid CAD medium pass CAD__00017__sp_Q9SJ25_CADH2_ARATH
Ccatscaffold379820219520 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Ccatscaffold389600224020 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold396080225900 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold40190227930 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Ccatscaffold403680228920 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold403680228930 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold404780229630 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Ccatscaffold418980236460 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold428780240770 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Ccatscaffold431990241840 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Ccatscaffold431990241850 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Ccatscaffold441760246550 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold441760246570 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold451540251030 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Ccatscaffold496040263950 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold496040263960 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold496040263980 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold510140267850 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Ccatscaffold544000277950 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
Ccatscaffold544000277960 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Ccatscaffold597350289680 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold612570293060 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Ccatscaffold648440297410 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Ccatscaffold648440297430 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Ccatscaffold677370313960 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Ccatscaffold677800314380 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Ccatscaffold679230315070 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold692540324140 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Ccatscaffold153340024720 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Ccatscaffold161770039860 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
Ccatscaffold163160041380 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Ccatscaffold163160041980 Phenylpropanoid CCR medium pass CCR__00008__sp_Q9S9N9_CCR1_ARATH
Ccatscaffold179460064600 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Ccatscaffold179460065370 Phenylpropanoid CCR medium pass CCR__00004__sp_G7JEE5_CCR2_MEDTR
Ccatscaffold260040135100 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
Ccatscaffold272790148800 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Ccatscaffold330840192980 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Ccatscaffold335190195570 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Ccatscaffold366810213460 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
Ccatscaffold410260233110 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
Ccatscaffold431990241720 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
Ccatscaffold510140267650 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
Ccatscaffold576600285060 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
Ccatscaffold685320319210 Phenylpropanoid CCR low borderline CCR__00003__sp_G7IYC1_CAD2_MEDTR
Ccatscaffold689030322020 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
Ccatscaffold182700068990 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Ccatscaffold217540096190 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Ccatscaffold343850201080 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Ccatscaffold412450234050 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH