Castanopsis hystrix (castanopsis_hystrix)
Imported from atlas release summary for Castanopsis hystrix.
1682
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1682
Candidate Genes
C4H
5.96%
BAHD
5.89%
C3'H/CYP98A
5.47%
UGT
5.32%
7DLGT
4.66%
UFGT
4.2%
T3O
3.56%
IFS
3.51%
Other Families
61.43%
More Families (96)
POD
142
3.48%
CYP76
141
3.46%
4CL
135
3.31%
F3H
110
2.7%
DWF4/CYP90B1
86
2.11%
NMT
85
2.09%
CAD
83
2.04%
F3'H/CYP75B
78
1.91%
STR
70
1.72%
TRI/TRII
68
1.67%
CAS
67
1.64%
BR6OX2/CYP85A2
64
1.57%
H6H
62
1.52%
CODM/T6ODM
56
1.37%
SMT1/SMT2/SMT3
56
1.37%
LAC
46
1.13%
GS
44
1.08%
HCT
44
1.08%
CYP71
44
1.08%
COMT
43
1.05%
TPS
38
0.93%
IFR
36
0.88%
TAT
35
0.86%
GES
34
0.83%
PYKS
34
0.83%
CYP90D1
34
0.83%
T16H
33
0.81%
SGD
32
0.79%
G8O/G8H
29
0.71%
RAS
29
0.71%
FNS
28
0.69%
PMT
27
0.66%
16OMT
27
0.66%
BR6OX1/CYP85A1
27
0.66%
IO
26
0.64%
NCS
25
0.61%
BBE
25
0.61%
ANR
24
0.59%
CSE
24
0.59%
LAMT
22
0.54%
SLS
21
0.52%
F3'5'H/CYP75A
19
0.47%
F5H/CYP84A
17
0.42%
CPD/CYP90A1
17
0.42%
8HGO
15
0.37%
PAL
15
0.37%
CCR
15
0.37%
ROT3/CYP90C1
15
0.37%
COR
14
0.34%
ANS/LDOX
13
0.32%
CYP51G1
13
0.32%
7DLH
12
0.29%
DFR
12
0.29%
CNMT
11
0.27%
ISY
11
0.27%
TYDC_DDC
9
0.22%
CCoAOMT
9
0.22%
6OMT_4OMT_SOMT
8
0.2%
CHS
8
0.2%
HPPR
8
0.2%
DXS
8
0.2%
GGPPS
8
0.2%
MPO
7
0.17%
CPR
7
0.17%
SQS/FDFT1
7
0.17%
AACT
7
0.17%
CYP719
6
0.15%
FPPS
6
0.15%
TDC
5
0.12%
CYP80B1
5
0.12%
SQE
5
0.12%
CYP80F1
4
0.1%
ODC
4
0.1%
DET2
4
0.1%
MVK
4
0.1%
MCT/IspD
4
0.1%
HMGR
4
0.1%
XMT_MXMT_DXMT
3
0.07%
CHI
3
0.07%
CPI1
3
0.07%
MVD
3
0.07%
DWF5
2
0.05%
SMO1/SMO2
2
0.05%
PMK
2
0.05%
CMK/IspE
2
0.05%
IDI
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
ADC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
FK
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
HMGS
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 492 | 19 | UGT (194) | View species results |
| Alkaloid pathway | 389 | 21 | 7DLGT (86) | View species results |
| Phenylpropanoid pathway | 306 | 12 | POD (115) | View species results |
| Flavonoid pathway | 228 | 10 | UFGT (156) | View species results |
| Rosmarinic acid pathway | 150 | 7 | C4H (62) | View species results |
| Steroid pathway | 117 | 12 | CAS (63) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1445 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 313 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| castanopsis_hystrix_GWHPBWDD000956 | Flavonoid | 4CL | low | borderline | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| castanopsis_hystrix_GWHPBWDD001461 | Flavonoid | 4CL | low | borderline | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| castanopsis_hystrix_GWHPBWDD004301 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| castanopsis_hystrix_GWHPBWDD004378 | Flavonoid | 4CL | medium | pass | 4CL__00007__sp_Q42524_4CL1_ARATH |
| castanopsis_hystrix_GWHPBWDD005744 | Flavonoid | 4CL | low | borderline | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| castanopsis_hystrix_GWHPBWDD005745 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| castanopsis_hystrix_GWHPBWDD006520 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD006774 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD007201 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| castanopsis_hystrix_GWHPBWDD007220 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD008053 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| castanopsis_hystrix_GWHPBWDD009017 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| castanopsis_hystrix_GWHPBWDD009982 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| castanopsis_hystrix_GWHPBWDD011703 | Flavonoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| castanopsis_hystrix_GWHPBWDD012656 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| castanopsis_hystrix_GWHPBWDD015715 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| castanopsis_hystrix_GWHPBWDD016673 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| castanopsis_hystrix_GWHPBWDD016675 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| castanopsis_hystrix_GWHPBWDD016677 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| castanopsis_hystrix_GWHPBWDD019052 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| castanopsis_hystrix_GWHPBWDD020984 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD022267 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD022468 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| castanopsis_hystrix_GWHPBWDD022897 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| castanopsis_hystrix_GWHPBWDD023154 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| castanopsis_hystrix_GWHPBWDD023367 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| castanopsis_hystrix_GWHPBWDD024355 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| castanopsis_hystrix_GWHPBWDD024837 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD025558 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| castanopsis_hystrix_GWHPBWDD027069 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD027071 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD027388 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD028011 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| castanopsis_hystrix_GWHPBWDD028937 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| castanopsis_hystrix_GWHPBWDD029855 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD029857 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD030191 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD030356 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| castanopsis_hystrix_GWHPBWDD030594 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| castanopsis_hystrix_GWHPBWDD030595 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| castanopsis_hystrix_GWHPBWDD030596 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| castanopsis_hystrix_GWHPBWDD031845 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| castanopsis_hystrix_GWHPBWDD031986 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| castanopsis_hystrix_GWHPBWDD033039 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| castanopsis_hystrix_GWHPBWDD036515 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| castanopsis_hystrix_GWHPBWDD002936 | Flavonoid | ANR | medium | borderline | ANR__00001__sp_Q5FB34_ANRCS_VITVI |
| castanopsis_hystrix_GWHPBWDD002941 | Flavonoid | ANR | medium | borderline | ANR__00001__sp_Q5FB34_ANRCS_VITVI |
| castanopsis_hystrix_GWHPBWDD004543 | Flavonoid | ANR | medium | borderline | ANR__00001__sp_Q5FB34_ANRCS_VITVI |
| castanopsis_hystrix_GWHPBWDD008989 | Flavonoid | ANR | medium | borderline | ANR__00001__sp_Q5FB34_ANRCS_VITVI |
| castanopsis_hystrix_GWHPBWDD010540 | Flavonoid | ANR | medium | borderline | ANR__00001__sp_Q5FB34_ANRCS_VITVI |